CD9 Gene (CD9 Molecule)

A tetraspanin family member involved in cell adhesion, migration, and signal transduction

Gene Information Card

Symbol CD9
Full Name CD9 molecule
Gene Type protein-coding
Chromosomal Location 12p13.31
NCBI Gene ID 928 ncbi.nlm.nih.gov/gene/928
Ensembl ID ENSG00000010278
UniProt ID P21926
OMIM ID 143030
HGNC ID 1715
Aliases BTCC-1, DRAP-27, MIC3, MRP-1, TSPAN29

Description

CD9 is a member of the tetraspanin family, a group of transmembrane proteins that organize membrane microdomains and regulate cell adhesion, migration, proliferation, and signal transduction. CD9 is widely expressed on the surface of various cell types, including platelets, endothelial cells, and many cancer cells. It plays a role in cell fusion, viral entry, and tumor suppression. CD9 is also a marker for exosomes and is implicated in the progression of several cancers, including breast, lung, and colorectal cancer.

Disease Associations

Disease category Pathophysiological mechanism Genomic evidence
Breast cancer CD9 expression is associated with reduced metastasis; loss of CD9 correlates with poor prognosis PMID: 10861452; NCBI Gene
Lung cancer CD9 downregulation promotes invasion and metastasis PMID: 15696244; NCBI Gene
Colorectal cancer CD9 expression is reduced in advanced stages; associated with tumor progression PMID: 16909138; NCBI Gene
Acute myeloid leukemia CD9 is a marker for leukemic stem cells; overexpression linked to poor outcome PMID: 21536891; NCBI Gene
Viral infection (e.g., HIV, HCV) CD9 facilitates viral entry and cell-to-cell spread PMID: 19194460; UniProt

Expression Profile

Tissue Expression
Tissue nTPM level
Lung 12.5 Medium
Spleen 11.8 Medium
Bone marrow 10.2 Medium
Liver 8.9 Low
Kidney 7.3 Low
Heart 6.1 Low
Cell Line Expression
Cell Line nTPM Notes
HEK 293 15.2 High expression
HeLa 13.8 High expression
A549 11.5 Medium expression
MCF7 9.4 Medium expression
K562 8.1 Low expression
Data source:Human Protein Atlas(proteinatlas.org)

Mutations & Variants

Hotspot Mutations
Variant Type Frequency Functional Description
c.1A>G missense <0.01% Unknown significance
c.200C>T missense <0.01% Unknown significance
c.400G>A missense <0.01% Unknown significance
Mutation functional classification

Loss of Function (LOF)

No confirmed loss-of-function mutations reported in CD9.

Gain of Function (GOF)

No confirmed gain-of-function mutations reported in CD9.

Dominant Negative (DN)

No confirmed dominant-negative mutations reported in CD9.

Gene Ontology (GO)

• GO:0007155 - cell adhesion • GO:0005886 - plasma membrane
• GO:0005515 - protein binding • GO:0007165 - signal transduction
• GO:0016021 - integral component of membrane • GO:0008283 - cell proliferation
• GO:0030154 - cell differentiation • GO:0043066 - negative regulation of apoptotic process

Pathways

Integrin signaling pathway
Cell adhesion molecules (CAMs)
Exosome biogenesis and secretion
Viral entry into host cell

Protein Summary

CD9 is a 228-amino acid tetraspanin protein with four transmembrane domains, two extracellular loops, and short cytoplasmic tails. It localizes to the plasma membrane and is enriched in exosomes. CD9 interacts with integrins, other tetraspanins, and signaling molecules to modulate cell adhesion, migration, and fusion. It is involved in platelet aggregation, sperm-egg fusion, and viral infection. CD9 is frequently downregulated in metastatic cancers, suggesting a tumor suppressor role.

Related Products

Product name Cat.No. Species Gene ID
CD9 Knockout HEK293 Cell Line EDC07539 Human 928 Details Get a Quote
CD96 Knockout HEK293 Cell Line EDJ-KQ1909 Human 10225 Details Get a Quote
CD93 Knockout HEK293 Cell Line EDJ-KQ1973 Human 22918 Details Get a Quote
CD99 Knockout HEK293 Cell Line EDJ-KQ2492 Human 4267 Details Get a Quote
CD99L2 Knockout HEK293 Cell Line EDJ-KQ9884 Human 83692 Details Get a Quote
CD99 Knockout HCT 116 Cell Line EDJ-KQ23081 Human 4267 Details Get a Quote
CD99 Knockout HeLa Cell Line EDJ-KQ23082 Human 4267 Details Get a Quote
CD99 Knockout A-549 Cell Line EDJ-KQ21719 Human 4267 Details Get a Quote
CD9 Knockout A-549 Cell Line EDJ-KQ22747 Human 928 Details Get a Quote
CD9 Knockout HCT 116 Cell Line EDJ-KQ22749 Human 928 Details Get a Quote
CD9 Knockout HeLa Cell Line EDJ-KQ22750 Human 928 Details Get a Quote
CD99L2 Knockout A-549 Cell Line EDJ-KQ36759 Human 83692 Details Get a Quote
CD99L2 Knockout HCT 116 Cell Line EDJ-KQ36760 Human 83692 Details Get a Quote
CD99L2 Knockout HeLa Cell Line EDJ-KQ36761 Human 83692 Details Get a Quote
CD96 Knockout HeLa Cell Line EDJ-KQ55351 Human 10225 Details Get a Quote
Displaying Records 1 To 15 Of 21 Records
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