CD27 Gene (TNF Receptor Superfamily Member 7)

CD27: A key co-stimulatory immune checkpoint molecule in T-cell and B-cell activation, with implications in lymphoproliferative disorders and primary immunodeficiencies.

Gene Information Card

Symbol CD27
Full Name CD27 molecule
Gene Type protein-coding
Chromosomal Location 12p13.31
NCBI Gene ID 939 ncbi.nlm.nih.gov/gene/939
Ensembl ID ENSG00000139193
UniProt ID P26842
OMIM ID 186711
HGNC ID 1692
Aliases TNFRSF7, S152, T14, Tp55

Description

CD27 is a member of the tumor necrosis factor receptor (TNFR) superfamily. It is expressed on the surface of lymphocytes, particularly T cells, B cells, and natural killer (NK) cells. CD27 binds to its ligand CD70, providing a co-stimulatory signal essential for T-cell expansion, B-cell differentiation, and plasma cell survival. CD27 signaling also regulates germinal center responses and memory B-cell formation. Loss-of-function mutations in CD27 cause a primary immunodeficiency characterized by severe Epstein-Barr virus (EBV) infection and lymphoproliferation. Somatic mutations and altered expression of CD27 are observed in various lymphomas and leukemias.

Disease Associations

Disease category Pathophysiological mechanism Genomic evidence
Lymphoproliferative syndrome 2 (LPFS2) Biallelic loss-of-function mutations in CD27 impair T-cell and B-cell co-stimulation, leading to defective immune control of EBV and uncontrolled lymphoproliferation. OMIM #615122; ClinVar
EBV-associated lymphoproliferative disease CD27 deficiency disrupts germinal center formation and memory B-cell generation, increasing susceptibility to EBV-driven B-cell expansion. OMIM #615122; NCBI Gene
Lymphoma (various subtypes) Somatic mutations and altered CD27 expression (e.g., in diffuse large B-cell lymphoma) may contribute to tumor immune evasion and aberrant signaling. COSMIC; PubMed
Common variable immunodeficiency (CVID) Rare CD27 mutations have been identified in patients with CVID-like phenotypes, associated with hypogammaglobulinemia and recurrent infections. ClinVar; OMIM

Expression Profile

Tissue Expression
Tissue nTPM level
Lymph node 45.2 High
Spleen 38.1 High
Bone marrow 12.5 Medium
Blood (whole) 8.9 Medium
Thymus 6.3 Medium
Lung 0.8 Low
Colon 0.5 Low
Cell Line Expression
Cell Line nTPM Notes
T cells (activated) 25.0 High expression upon activation
B cells (naive) 15.2 Moderate expression
NK cells 12.8 Moderate expression
Raji (Burkitt lymphoma) 8.5 Moderate expression
Jurkat (T-cell leukemia) 6.1 Low expression
K562 (erythroleukemia) 0.2 Not expressed
Data source:Human Protein Atlas(proteinatlas.org)

Mutations & Variants

Hotspot Mutations
Variant Type Frequency Functional Description
c.158G>A (p.Cys53Tyr) Missense Rare Loss of CD27 surface expression; associated with LPFS2
c.292C>T (p.Arg98*) Nonsense Rare Truncated protein; loss of function; immunodeficiency
c.1A>G (p.Met1?) Start loss Rare No protein production; complete CD27 deficiency
c.433_434delAG (p.Ser145fs) Frameshift Rare Premature stop; loss of function
c.572G>A (p.Arg191His) Missense Somatic (lymphoma) Unknown functional effect; reported in COSMIC
Mutation functional classification

Loss of Function (LOF)

Biallelic loss-of-function mutations (missense, nonsense, frameshift, start loss) cause CD27 deficiency, leading to impaired T-cell co-stimulation, defective germinal center responses, and susceptibility to EBV-driven lymphoproliferation.

Gain of Function (GOF)

No gain-of-function mutations are currently reported for CD27 in the consulted databases.

Dominant Negative (DN)

No dominant-negative mutations are currently reported for CD27 in the consulted databases.

Pathways

• CD27/CD70 signaling in lymphocytes (Reactome: R-HSA-5673001)
• TNF receptor superfamily signaling (KEGG: hsa04060)
• NF-kappa B signaling pathway (KEGG: hsa04064)

Protein Summary

CD27 is a type I transmembrane glycoprotein of 260 amino acids (UniProt P26842). It contains two cysteine-rich domains in the extracellular region characteristic of the TNFR superfamily. The intracellular domain contains a TRAF-binding motif that recruits TRAF2 and TRAF5, leading to activation of NF-κB and MAPK pathways. CD27 is expressed as a disulfide-linked homodimer on the cell surface. Proteolytic cleavage by ADAM17 releases a soluble form (sCD27) that can be detected in serum and is elevated in inflammatory conditions and lymphomas.

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