ZNF658 (Zinc Finger Protein 658): A KRAB-ZFP Transcriptional Regulator
Explore the genomic context, expression, and functional roles of ZNF658, a zinc finger protein implicated in transcriptional regulation and potential disease associations.
Gene Information Card
| Symbol | ZNF658 |
|---|---|
| Full Name | zinc finger protein 658 |
| Gene Type | protein-coding |
| Chromosomal Location | 9p13.3 |
| NCBI Gene ID | 26149 ncbi.nlm.nih.gov/gene/26149 |
| Ensembl ID | ENSG00000164946 |
| UniProt ID | Q5TEC6 |
| OMIM ID | Not available |
| HGNC ID | 30889 |
| Aliases | FLJ22531, MGC126688, MGC126690 |
Description
ZNF658 encodes a zinc finger protein belonging to the Krüppel-associated box (KRAB) domain-containing family of transcription factors. KRAB-ZFPs typically function as transcriptional repressors by recruiting chromatin-modifying complexes to specific genomic loci. ZNF658 contains multiple C2H2-type zinc finger domains, which mediate sequence-specific DNA binding. While its precise biological role is still under investigation, ZNF658 is expressed in various tissues and may be involved in regulating gene expression during development and cellular differentiation. The gene is located on chromosome 9p13.3, a region associated with several genetic disorders, suggesting potential clinical relevance.
Disease Associations
| Disease category | Pathophysiological mechanism | Genomic evidence |
|---|---|---|
| Not established | No direct disease association has been confirmed for ZNF658. However, its chromosomal location (9p13.3) is within a region implicated in certain cancers and developmental disorders, but specific evidence linking ZNF658 is lacking. | No direct evidence from OMIM or ClinVar; based on genomic context. |
Expression Profile
Tissue Expression
| Tissue | nTPM | level |
|---|---|---|
| Testis | 20.1 | Medium |
| Thyroid | 15.3 | Medium |
| Adrenal gland | 12.8 | Low |
| Bone marrow | 10.5 | Low |
| Lung | 8.9 | Low |
Cell Line Expression
| Cell Line | nTPM | Notes |
|---|---|---|
| K-562 | 25.4 | Leukemia cell line; high expression |
| HeLa | 18.2 | Cervical cancer cell line; moderate expression |
| HepG2 | 12.7 | Liver cancer cell line; low expression |
| A549 | 9.8 | Lung carcinoma cell line; low expression |
Data source:Human Protein Atlas(proteinatlas.org)
Mutations & Variants
Hotspot Mutations
| Variant | Type | Frequency | Functional Description |
|---|---|---|---|
| rs143174210 | Missense (p.Arg213His) | 0.0004 (ExAC) | Unknown functional effect; not reported in ClinVar |
| rs148211042 | Missense (p.Val456Met) | 0.0002 (ExAC) | Unknown functional effect; not reported in ClinVar |
Mutation functional classification
Loss of Function (LOF)
No loss-of-function mutations have been characterized for ZNF658 in the literature or databases.
Gain of Function (GOF)
No gain-of-function mutations have been reported.
Dominant Negative (DN)
No dominant-negative effects have been described.
View complete mutation data:
Gene Ontology (GO)
| • DNA binding | • zinc ion binding |
| • metal ion binding | • nucleus |
| • regulation of transcription | • DNA-templated |
Pathways
• No specific pathways are curated for ZNF658 in major pathway databases (e.g.
• KEGG
• Reactome). As a KRAB-ZFP
• it may participate in chromatin remodeling and transcriptional repression pathways.
Protein Summary
ZNF658 is a 658-amino acid protein containing an N-terminal KRAB domain and multiple C2H2 zinc finger motifs. The KRAB domain is known to mediate protein-protein interactions with co-repressors such as KAP1 (TRIM28), leading to histone methylation and transcriptional silencing. The zinc finger array likely recognizes specific DNA sequences, targeting the protein to particular gene promoters or enhancers. Structural predictions suggest a canonical C2H2 zinc finger fold, but experimental characterization of its DNA-binding specificity and target genes remains incomplete. ZNF658 is localized to the nucleus, consistent with its role as a transcription factor.
Related Services
Related Products
| Product name | Cat.No. | Species | Gene ID | |
|---|---|---|---|---|
| ZNF658 Knockout HEK293 Cell Line | EDJ-KQ7759 | Human | 26149 | Details Get a Quote |
| ZNF658 Knockout A-549 Cell Line | EDJ-KQ34545 | Human | 26149 | Details Get a Quote |
| ZNF658 Knockout HCT 116 Cell Line | EDJ-KQ34546 | Human | 26149 | Details Get a Quote |
| ZNF658 Knockout HeLa Cell Line | EDJ-KQ34547 | Human | 26149 | Details Get a Quote |