ZNF658 (Zinc Finger Protein 658): A KRAB-ZFP Transcriptional Regulator

Explore the genomic context, expression, and functional roles of ZNF658, a zinc finger protein implicated in transcriptional regulation and potential disease associations.

Gene Information Card

Symbol ZNF658
Full Name zinc finger protein 658
Gene Type protein-coding
Chromosomal Location 9p13.3
NCBI Gene ID 26149 ncbi.nlm.nih.gov/gene/26149
Ensembl ID ENSG00000164946
UniProt ID Q5TEC6
OMIM ID Not available
HGNC ID 30889
Aliases FLJ22531, MGC126688, MGC126690

Description

ZNF658 encodes a zinc finger protein belonging to the Krüppel-associated box (KRAB) domain-containing family of transcription factors. KRAB-ZFPs typically function as transcriptional repressors by recruiting chromatin-modifying complexes to specific genomic loci. ZNF658 contains multiple C2H2-type zinc finger domains, which mediate sequence-specific DNA binding. While its precise biological role is still under investigation, ZNF658 is expressed in various tissues and may be involved in regulating gene expression during development and cellular differentiation. The gene is located on chromosome 9p13.3, a region associated with several genetic disorders, suggesting potential clinical relevance.

Disease Associations

Disease category Pathophysiological mechanism Genomic evidence
Not established No direct disease association has been confirmed for ZNF658. However, its chromosomal location (9p13.3) is within a region implicated in certain cancers and developmental disorders, but specific evidence linking ZNF658 is lacking. No direct evidence from OMIM or ClinVar; based on genomic context.

Expression Profile

Tissue Expression
Tissue nTPM level
Testis 20.1 Medium
Thyroid 15.3 Medium
Adrenal gland 12.8 Low
Bone marrow 10.5 Low
Lung 8.9 Low
Cell Line Expression
Cell Line nTPM Notes
K-562 25.4 Leukemia cell line; high expression
HeLa 18.2 Cervical cancer cell line; moderate expression
HepG2 12.7 Liver cancer cell line; low expression
A549 9.8 Lung carcinoma cell line; low expression
Data source:Human Protein Atlas(proteinatlas.org)

Mutations & Variants

Hotspot Mutations
Variant Type Frequency Functional Description
rs143174210 Missense (p.Arg213His) 0.0004 (ExAC) Unknown functional effect; not reported in ClinVar
rs148211042 Missense (p.Val456Met) 0.0002 (ExAC) Unknown functional effect; not reported in ClinVar
Mutation functional classification

Loss of Function (LOF)

No loss-of-function mutations have been characterized for ZNF658 in the literature or databases.

Gain of Function (GOF)

No gain-of-function mutations have been reported.

Dominant Negative (DN)

No dominant-negative effects have been described.

Gene Ontology (GO)

• DNA binding • zinc ion binding
• metal ion binding • nucleus
• regulation of transcription • DNA-templated

Pathways

• No specific pathways are curated for ZNF658 in major pathway databases (e.g.
• KEGG
• Reactome). As a KRAB-ZFP
• it may participate in chromatin remodeling and transcriptional repression pathways.

Protein Summary

ZNF658 is a 658-amino acid protein containing an N-terminal KRAB domain and multiple C2H2 zinc finger motifs. The KRAB domain is known to mediate protein-protein interactions with co-repressors such as KAP1 (TRIM28), leading to histone methylation and transcriptional silencing. The zinc finger array likely recognizes specific DNA sequences, targeting the protein to particular gene promoters or enhancers. Structural predictions suggest a canonical C2H2 zinc finger fold, but experimental characterization of its DNA-binding specificity and target genes remains incomplete. ZNF658 is localized to the nucleus, consistent with its role as a transcription factor.

Related Products

Product name Cat.No. Species Gene ID
ZNF658 Knockout HEK293 Cell Line EDJ-KQ7759 Human 26149 Details Get a Quote
ZNF658 Knockout A-549 Cell Line EDJ-KQ34545 Human 26149 Details Get a Quote
ZNF658 Knockout HCT 116 Cell Line EDJ-KQ34546 Human 26149 Details Get a Quote
ZNF658 Knockout HeLa Cell Line EDJ-KQ34547 Human 26149 Details Get a Quote
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