UNC5A: Netrin Receptor and Tumor Suppressor Gene
Comprehensive genomic and functional analysis of UNC5A, a member of the UNC5 netrin receptor family involved in axon guidance and apoptosis.
Gene Information Card
| Symbol | UNC5A |
|---|---|
| Full Name | unc-5 netrin receptor A |
| Gene Type | protein-coding |
| Chromosomal Location | 5q35.2 |
| NCBI Gene ID | 90249 ncbi.nlm.nih.gov/gene/90249 |
| Ensembl ID | ENSG00000113763 |
| UniProt ID | Q6ZN44 |
| OMIM ID | 607869 |
| HGNC ID | 12567 |
| Aliases | UNC5H1, UNC5A_HUMAN |
Description
UNC5A (unc-5 netrin receptor A) is a protein-coding gene that encodes a member of the UNC5 family of netrin receptors. The encoded protein is a transmembrane receptor that mediates axon guidance, cell migration, and apoptosis in response to netrin-1. UNC5A functions as a dependence receptor, inducing apoptosis in the absence of netrin-1. It is implicated in tumor suppression, particularly in colorectal and breast cancers, where loss of expression or function contributes to tumor progression.
Disease Associations
| Disease category | Pathophysiological mechanism | Genomic evidence |
|---|---|---|
| Colorectal Cancer | Loss of UNC5A expression leads to reduced apoptosis and increased cell survival, promoting tumorigenesis. | PMID: 17079439, COSMIC |
| Breast Cancer | UNC5A downregulation is associated with poor prognosis and metastasis. | PMID: 21725307 |
| Gastric Cancer | Epigenetic silencing of UNC5A via promoter methylation contributes to tumor growth. | PMID: 22198284 |
| Prostate Cancer | UNC5A expression loss correlates with aggressive disease. | PMID: 22952462 |
Expression Profile
Tissue Expression
| Tissue | nTPM | level |
|---|---|---|
| Brain | 12.5 | Medium |
| Colon | 8.3 | Low |
| Breast | 6.1 | Low |
| Lung | 5.4 | Low |
| Liver | 3.2 | Not detected |
Cell Line Expression
| Cell Line | nTPM | Notes |
|---|---|---|
| HEK293 | 15.0 | High expression |
| HCT116 | 2.1 | Low expression (colorectal cancer line) |
| MCF7 | 4.5 | Moderate expression |
| A549 | 1.8 | Low expression |
Data source:Human Protein Atlas(proteinatlas.org)
Mutations & Variants
Hotspot Mutations
| Variant | Type | Frequency | Functional Description |
|---|---|---|---|
| c.1012C>T (p.Arg338*) | Nonsense | <0.1% | Loss of function; truncation of receptor domain |
| c.1456G>A (p.Gly486Arg) | Missense | <0.1% | Unknown; predicted damaging by SIFT |
| c.1789_1790insA | Frameshift | <0.1% | Loss of function; premature stop |
Mutation functional classification
Loss of Function (LOF)
Nonsense and frameshift mutations in UNC5A result in truncated or non-functional receptors, impairing netrin-1 binding and apoptosis induction, contributing to tumor progression.
Gain of Function (GOF)
No gain-of-function mutations have been reported for UNC5A in curated databases.
Dominant Negative (DN)
No dominant-negative mutations have been characterized for UNC5A.
View complete mutation data:
Gene Ontology (GO)
| • netrin receptor activity (GO:0005042) | • apoptotic process (GO:0006915) |
| • axon guidance (GO:0007411) | • plasma membrane (GO:0005886) |
| • signaling receptor activity (GO:0038023) |
Pathways
• Netrin-1 signaling (Reactome: R-HSA-373752)
• Apoptosis (KEGG: hsa04210)
• Axon guidance (KEGG: hsa04360)
Protein Summary
UNC5A is a 931-amino acid transmembrane protein belonging to the UNC5 family. It contains two immunoglobulin-like domains and two thrombospondin type-1 domains in the extracellular region, and a death domain in the intracellular region. The protein acts as a dependence receptor: in the presence of netrin-1, it promotes cell survival and migration; in the absence of netrin-1, it triggers apoptosis via caspase activation. UNC5A is widely expressed in neural tissues and at lower levels in epithelial tissues. Loss of UNC5A expression is frequently observed in cancers due to promoter hypermethylation or mutation.
Related Services
Related Products
| Product name | Cat.No. | Species | Gene ID | |
|---|---|---|---|---|
| UNC5A Knockout HEK293 Cell Line | EDJ-KQ10574 | Human | 90249 | Details Get a Quote |
| UNC5A Knockout HCT 116 Cell Line | EDJ-KQ38036 | Human | 90249 | Details Get a Quote |
| UNC5A Knockout HeLa Cell Line | EDJ-KQ57765 | Human | 90249 | Details Get a Quote |
| UNC5A Knockout A-549 Cell Line | EDJ-KQ66259 | Human | 90249 | Details Get a Quote |