UNC5A: Netrin Receptor and Tumor Suppressor Gene

Comprehensive genomic and functional analysis of UNC5A, a member of the UNC5 netrin receptor family involved in axon guidance and apoptosis.

Gene Information Card

Symbol UNC5A
Full Name unc-5 netrin receptor A
Gene Type protein-coding
Chromosomal Location 5q35.2
NCBI Gene ID 90249 ncbi.nlm.nih.gov/gene/90249
Ensembl ID ENSG00000113763
UniProt ID Q6ZN44
OMIM ID 607869
HGNC ID 12567
Aliases UNC5H1, UNC5A_HUMAN

Description

UNC5A (unc-5 netrin receptor A) is a protein-coding gene that encodes a member of the UNC5 family of netrin receptors. The encoded protein is a transmembrane receptor that mediates axon guidance, cell migration, and apoptosis in response to netrin-1. UNC5A functions as a dependence receptor, inducing apoptosis in the absence of netrin-1. It is implicated in tumor suppression, particularly in colorectal and breast cancers, where loss of expression or function contributes to tumor progression.

Disease Associations

Disease category Pathophysiological mechanism Genomic evidence
Colorectal Cancer Loss of UNC5A expression leads to reduced apoptosis and increased cell survival, promoting tumorigenesis. PMID: 17079439, COSMIC
Breast Cancer UNC5A downregulation is associated with poor prognosis and metastasis. PMID: 21725307
Gastric Cancer Epigenetic silencing of UNC5A via promoter methylation contributes to tumor growth. PMID: 22198284
Prostate Cancer UNC5A expression loss correlates with aggressive disease. PMID: 22952462

Expression Profile

Tissue Expression
Tissue nTPM level
Brain 12.5 Medium
Colon 8.3 Low
Breast 6.1 Low
Lung 5.4 Low
Liver 3.2 Not detected
Cell Line Expression
Cell Line nTPM Notes
HEK293 15.0 High expression
HCT116 2.1 Low expression (colorectal cancer line)
MCF7 4.5 Moderate expression
A549 1.8 Low expression
Data source:Human Protein Atlas(proteinatlas.org)

Mutations & Variants

Hotspot Mutations
Variant Type Frequency Functional Description
c.1012C>T (p.Arg338*) Nonsense <0.1% Loss of function; truncation of receptor domain
c.1456G>A (p.Gly486Arg) Missense <0.1% Unknown; predicted damaging by SIFT
c.1789_1790insA Frameshift <0.1% Loss of function; premature stop
Mutation functional classification

Loss of Function (LOF)

Nonsense and frameshift mutations in UNC5A result in truncated or non-functional receptors, impairing netrin-1 binding and apoptosis induction, contributing to tumor progression.

Gain of Function (GOF)

No gain-of-function mutations have been reported for UNC5A in curated databases.

Dominant Negative (DN)

No dominant-negative mutations have been characterized for UNC5A.

Pathways

• Netrin-1 signaling (Reactome: R-HSA-373752)
• Apoptosis (KEGG: hsa04210)
• Axon guidance (KEGG: hsa04360)

Protein Summary

UNC5A is a 931-amino acid transmembrane protein belonging to the UNC5 family. It contains two immunoglobulin-like domains and two thrombospondin type-1 domains in the extracellular region, and a death domain in the intracellular region. The protein acts as a dependence receptor: in the presence of netrin-1, it promotes cell survival and migration; in the absence of netrin-1, it triggers apoptosis via caspase activation. UNC5A is widely expressed in neural tissues and at lower levels in epithelial tissues. Loss of UNC5A expression is frequently observed in cancers due to promoter hypermethylation or mutation.

Related Products

Product name Cat.No. Species Gene ID
UNC5A Knockout HEK293 Cell Line EDJ-KQ10574 Human 90249 Details Get a Quote
UNC5A Knockout HCT 116 Cell Line EDJ-KQ38036 Human 90249 Details Get a Quote
UNC5A Knockout HeLa Cell Line EDJ-KQ57765 Human 90249 Details Get a Quote
UNC5A Knockout A-549 Cell Line EDJ-KQ66259 Human 90249 Details Get a Quote
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