TRMT10B Gene: tRNA Methyltransferase 10B
Genetic and Functional Insights into TRMT10B
Gene Information Card
| Symbol | TRMT10B |
|---|---|
| Full Name | tRNA methyltransferase 10B |
| Gene Type | protein-coding |
| Chromosomal Location | 9p13.3 |
| NCBI Gene ID | 158234 ncbi.nlm.nih.gov/gene/158234 |
| Ensembl ID | ENSG00000165029 |
| UniProt ID | Q6P1R3 |
| OMIM ID | 616146 |
| HGNC ID | 26316 |
| Aliases | TRM10B, FLJ13236, MGC131944 |
Description
TRMT10B encodes a tRNA methyltransferase enzyme that catalyzes the N1-methylation of guanine at position 9 (m1G9) in tRNA molecules. This modification is important for tRNA stability and proper protein translation. The protein is localized in the nucleus and cytoplasm, and its expression is ubiquitous across tissues. TRMT10B is part of the TRM10 family of methyltransferases, which also includes TRMT10A and TRMT10C. While TRMT10A has been linked to microcephaly and intellectual disability, TRMT10B's specific physiological roles are less characterized, but it is believed to contribute to similar tRNA modification processes.
Disease Associations
| Disease category | Pathophysiological mechanism | Genomic evidence |
|---|---|---|
| No specific disease association | Not established | No direct evidence from ClinVar or OMIM for disease-causing mutations in TRMT10B. |
Expression Profile
Tissue Expression
| Tissue | nTPM | level |
|---|---|---|
| Brain | 12.3 | Medium |
| Heart | 8.5 | Low |
| Liver | 10.1 | Medium |
| Kidney | 9.2 | Low |
| Testis | 15.7 | High |
Cell Line Expression
| Cell Line | nTPM | Notes |
|---|---|---|
| HeLa | 11.4 | Cervical cancer cell line |
| A549 | 9.8 | Lung cancer cell line |
| HepG2 | 10.6 | Liver cancer cell line |
| K562 | 8.9 | Leukemia cell line |
Data source:Human Protein Atlas(proteinatlas.org)
Mutations & Variants
Hotspot Mutations
| Variant | Type | Frequency | Functional Description |
|---|---|---|---|
| No common variants | Not applicable | Not applicable | No pathogenic variants reported in ClinVar. |
Mutation functional classification
Loss of Function (LOF)
No evidence of loss-of-function mutations causing disease.
Gain of Function (GOF)
No evidence of gain-of-function mutations.
Dominant Negative (DN)
No evidence of dominant-negative effects.
View complete mutation data:
Gene Ontology (GO)
| • tRNA (guanine-N1-)-methyltransferase activity | • tRNA binding |
| • methyltransferase activity | • nucleus |
| • cytoplasm |
Pathways
• tRNA modification in the nucleus and cytoplasm
Protein Summary
TRMT10B is a 45 kDa protein consisting of 400 amino acids. It contains a conserved methyltransferase domain that is responsible for its catalytic activity. The protein is involved in the post-transcriptional modification of tRNA, specifically adding a methyl group to the N1 position of guanine at position 9. This modification is crucial for maintaining the correct structure and function of tRNA, thereby ensuring accurate protein synthesis. TRMT10B is widely expressed, with higher levels in testis and brain, suggesting a role in tissues with high translational activity.
Related Services
Related Products
| Product name | Cat.No. | Species | Gene ID | |
|---|---|---|---|---|
| TRMT10B Knockout HEK293 Cell Line | EDJ-KQ15148 | Human | 158234 | Details Get a Quote |
| TRMT10B Knockout A-549 Cell Line | EDJ-KQ46958 | Human | 158234 | Details Get a Quote |
| TRMT10B Knockout HCT 116 Cell Line | EDJ-KQ46960 | Human | 158234 | Details Get a Quote |
| TRMT10B Knockout HeLa Cell Line | EDJ-KQ46961 | Human | 158234 | Details Get a Quote |