TRMT10B Gene: tRNA Methyltransferase 10B

Genetic and Functional Insights into TRMT10B

Gene Information Card

Symbol TRMT10B
Full Name tRNA methyltransferase 10B
Gene Type protein-coding
Chromosomal Location 9p13.3
NCBI Gene ID 158234 ncbi.nlm.nih.gov/gene/158234
Ensembl ID ENSG00000165029
UniProt ID Q6P1R3
OMIM ID 616146
HGNC ID 26316
Aliases TRM10B, FLJ13236, MGC131944

Description

TRMT10B encodes a tRNA methyltransferase enzyme that catalyzes the N1-methylation of guanine at position 9 (m1G9) in tRNA molecules. This modification is important for tRNA stability and proper protein translation. The protein is localized in the nucleus and cytoplasm, and its expression is ubiquitous across tissues. TRMT10B is part of the TRM10 family of methyltransferases, which also includes TRMT10A and TRMT10C. While TRMT10A has been linked to microcephaly and intellectual disability, TRMT10B's specific physiological roles are less characterized, but it is believed to contribute to similar tRNA modification processes.

Disease Associations

Disease category Pathophysiological mechanism Genomic evidence
No specific disease association Not established No direct evidence from ClinVar or OMIM for disease-causing mutations in TRMT10B.

Expression Profile

Tissue Expression
Tissue nTPM level
Brain 12.3 Medium
Heart 8.5 Low
Liver 10.1 Medium
Kidney 9.2 Low
Testis 15.7 High
Cell Line Expression
Cell Line nTPM Notes
HeLa 11.4 Cervical cancer cell line
A549 9.8 Lung cancer cell line
HepG2 10.6 Liver cancer cell line
K562 8.9 Leukemia cell line
Data source:Human Protein Atlas(proteinatlas.org)

Mutations & Variants

Hotspot Mutations
Variant Type Frequency Functional Description
No common variants Not applicable Not applicable No pathogenic variants reported in ClinVar.
Mutation functional classification

Loss of Function (LOF)

No evidence of loss-of-function mutations causing disease.

Gain of Function (GOF)

No evidence of gain-of-function mutations.

Dominant Negative (DN)

No evidence of dominant-negative effects.

Gene Ontology (GO)

• tRNA (guanine-N1-)-methyltransferase activity • tRNA binding
• methyltransferase activity • nucleus
• cytoplasm

Pathways

• tRNA modification in the nucleus and cytoplasm

Protein Summary

TRMT10B is a 45 kDa protein consisting of 400 amino acids. It contains a conserved methyltransferase domain that is responsible for its catalytic activity. The protein is involved in the post-transcriptional modification of tRNA, specifically adding a methyl group to the N1 position of guanine at position 9. This modification is crucial for maintaining the correct structure and function of tRNA, thereby ensuring accurate protein synthesis. TRMT10B is widely expressed, with higher levels in testis and brain, suggesting a role in tissues with high translational activity.

Related Products

Product name Cat.No. Species Gene ID
TRMT10B Knockout HEK293 Cell Line EDJ-KQ15148 Human 158234 Details Get a Quote
TRMT10B Knockout A-549 Cell Line EDJ-KQ46958 Human 158234 Details Get a Quote
TRMT10B Knockout HCT 116 Cell Line EDJ-KQ46960 Human 158234 Details Get a Quote
TRMT10B Knockout HeLa Cell Line EDJ-KQ46961 Human 158234 Details Get a Quote
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