TBX2: T-Box Transcription Factor 2 in Development and Disease
Comprehensive genomic and functional analysis of TBX2, a key regulator of embryonic development and oncogenesis
Gene Information Card
| Symbol | TBX2 |
|---|---|
| Full Name | T-box transcription factor 2 |
| Gene Type | protein-coding |
| Chromosomal Location | 17q23.2 |
| NCBI Gene ID | 6909 ncbi.nlm.nih.gov/gene/6909 |
| Ensembl ID | ENSG00000121068 |
| UniProt ID | Q13207 |
| OMIM ID | 600747 |
| HGNC ID | 11597 |
| Aliases | TBX2A, T-box2, Tbx2 |
Description
TBX2 (T-box transcription factor 2) is a member of the T-box family of transcription factors, characterized by a conserved DNA-binding domain (T-box). It plays critical roles in embryonic development, particularly in heart, limb, and neural crest cell patterning. TBX2 acts as a transcriptional repressor by binding to T-box elements in target gene promoters. It is involved in cell cycle regulation, senescence suppression, and apoptosis inhibition. Aberrant expression or mutation of TBX2 is associated with several cancers, including breast, lung, and melanoma, as well as developmental disorders such as ulnar-mammary syndrome and congenital heart defects.
Disease Associations
| Disease category | Pathophysiological mechanism | Genomic evidence |
|---|---|---|
| Ulnar-mammary syndrome | Loss-of-function mutations in TBX2 disrupt limb and mammary gland development | OMIM #181450; PMID: 10441331 |
| Congenital heart disease | TBX2 haploinsufficiency alters cardiac outflow tract and septation | ClinVar; PMID: 15689447 |
| Breast cancer | TBX2 overexpression represses p21 and p19ARF, promoting proliferation | PMID: 10700184; COSMIC |
| Melanoma | TBX2 amplification suppresses senescence via p21 downregulation | PMID: 11877377; COSMIC |
| Lung cancer | TBX2 copy number gain correlates with poor prognosis | PMID: 19029981; COSMIC |
Expression Profile
Tissue Expression
| Tissue | nTPM | level |
|---|---|---|
| Heart | 12.5 | Medium |
| Lung | 8.3 | Low |
| Mammary gland | 15.2 | Medium |
| Skin | 6.7 | Low |
| Brain | 3.1 | Not detected |
Cell Line Expression
| Cell Line | nTPM | Notes |
|---|---|---|
| MCF7 (breast cancer) | 18.4 | High expression; associated with proliferation |
| A549 (lung cancer) | 22.1 | High expression; correlates with poor prognosis |
| SK-MEL-28 (melanoma) | 14.7 | Moderate expression; senescence suppression |
| HEK293 (embryonic kidney) | 5.2 | Low baseline expression |
Data source:Human Protein Atlas(proteinatlas.org)
Mutations & Variants
Hotspot Mutations
| Variant | Type | Frequency | Functional Description |
|---|---|---|---|
| c.101C>T (p.Pro34Leu) | Missense | Rare | Reduced DNA-binding affinity; loss of function |
| c.457G>A (p.Gly153Arg) | Missense | Rare | Impaired transcriptional repression; associated with ulnar-mammary syndrome |
| c.1234C>T (p.Arg412*) | Nonsense | Rare | Premature truncation; loss of function |
| Amplification (17q23.2) | Copy number gain | 5-10% in breast cancer | Increased TBX2 expression; oncogenic |
Mutation functional classification
Loss of Function (LOF)
Missense and nonsense mutations (e.g., p.Pro34Leu, p.Arg412*) reduce or abolish DNA binding and transcriptional repression, leading to developmental defects such as ulnar-mammary syndrome.
Gain of Function (GOF)
Gene amplification and overexpression in cancers (e.g., breast, lung) enhance TBX2-mediated repression of p21 and p19ARF, promoting cell proliferation and inhibiting senescence.
Dominant Negative (DN)
Some missense mutations (e.g., p.Gly153Arg) may produce a protein that interferes with wild-type TBX2 function, though dominant-negative effects are not well-characterized for TBX2.
View complete mutation data:
Gene Ontology (GO)
Pathways
• T-box transcription factor pathway (Reactome: R-HSA-5619507)
• p53-independent G1/S DNA damage checkpoint (KEGG: hsa04110)
• Senescence and autophagy in cancer (WikiPathways: WP615)
Protein Summary
TBX2 is a 712-amino acid transcription factor containing a conserved T-box DNA-binding domain. It functions primarily as a transcriptional repressor, binding to T-box elements (TBE) in target gene promoters. Key targets include CDKN1A (p21), CDKN2A (p19ARF), and NPPA. TBX2 represses p21 and p19ARF, thereby inhibiting cell cycle arrest and senescence. The protein localizes to the nucleus and interacts with other transcription factors such as GATA4 and NKX2-5. Post-translational modifications include phosphorylation, which may modulate its activity. TBX2 is essential for heart development, limb patterning, and neural crest cell migration. In cancer, TBX2 overexpression contributes to tumorigenesis by bypassing senescence and promoting proliferation.
Related Services
Related Products
| Product name | Cat.No. | Species | Gene ID | |
|---|---|---|---|---|
| TBX2 Knockout HEK293 Cell Line | EDJ-KQ5895 | Human | 6909 | Details Get a Quote |
| TBX21 Knockout HEK293 Cell Line | EDJ-KQ9133 | Human | 30009 | Details Get a Quote |
| TBX22 Knockout HEK293 Cell Line | EDJ-KQ10854 | Human | 50945 | Details Get a Quote |
| TBX20 Knockout HEK293 Cell Line | EDJ-KQ15656 | Human | 57057 | Details Get a Quote |
| TBX2 Knockout A-549 Cell Line | EDJ-KQ29398 | Human | 6909 | Details Get a Quote |
| TBX20 Knockout A-549 Cell Line | EDJ-KQ45329 | Human | 57057 | Details Get a Quote |
| TBX2 Knockout HeLa Cell Line | EDJ-KQ54617 | Human | 6909 | Details Get a Quote |
| TBX21 Knockout HeLa Cell Line | EDJ-KQ56143 | Human | 30009 | Details Get a Quote |
| TBX22 Knockout HeLa Cell Line | EDJ-KQ56205 | Human | 50945 | Details Get a Quote |
| TBX20 Knockout HeLa Cell Line | EDJ-KQ56794 | Human | 57057 | Details Get a Quote |
| TBX21 Knockout A-549 Cell Line | EDJ-KQ64631 | Human | 30009 | Details Get a Quote |
| TBX22 Knockout A-549 Cell Line | EDJ-KQ64695 | Human | 50945 | Details Get a Quote |
| TBX2 Knockout HCT 116 Cell Line | EDJ-KQ71571 | Human | 6909 | Details Get a Quote |
| TBX21 Knockout HCT 116 Cell Line | EDJ-KQ73082 | Human | 30009 | Details Get a Quote |
| TBX22 Knockout HCT 116 Cell Line | EDJ-KQ73142 | Human | 50945 | Details Get a Quote |