SUFU: A Key Negative Regulator of the Hedgehog Signaling Pathway
Comprehensive gene card for SUFU (Suppressor of Fused Homolog), including genomic annotations, expression data, disease associations, and mutation profiles.
Gene Information Card
| Symbol | SUFU |
|---|---|
| Full Name | Suppressor of Fused Homolog |
| Gene Type | Protein coding |
| Chromosomal Location | 10q24.32 |
| NCBI Gene ID | 51684 ncbi.nlm.nih.gov/gene/51684 |
| Ensembl ID | ENSG00000107882 |
| UniProt ID | Q9UMX1 |
| OMIM ID | 607035 |
| HGNC ID | 16466 |
| Aliases | PRO1280, SUFUH, SUFUXL, hSufu |
Description
SUFU encodes a negative regulator of the Hedgehog (Hh) signaling pathway. The protein binds to GLI transcription factors and sequesters them in the cytoplasm, preventing their nuclear translocation and target gene activation. SUFU also plays a role in primary cilium function and cell proliferation. Loss-of-function mutations in SUFU lead to constitutive Hh pathway activation and are associated with medulloblastoma, basal cell carcinoma, and Gorlin syndrome.
Disease Associations
| Disease category | Pathophysiological mechanism | Genomic evidence |
|---|---|---|
| Medulloblastoma (desmoplastic/nodular) | Loss of SUFU function leads to aberrant GLI activation and tumorigenesis | PMID: 19265751, COSMIC |
| Basal cell carcinoma | SUFU mutations cause constitutive Hedgehog signaling in skin | PMID: 19265751, ClinVar |
| Gorlin syndrome (nevoid basal cell carcinoma syndrome) | Germline SUFU mutations predispose to multiple BCCs and medulloblastoma | OMIM #607035, ClinVar |
| Rhabdomyosarcoma | SUFU loss contributes to Hedgehog-driven muscle tumors | PMID: 19265751, COSMIC |
Expression Profile
Tissue Expression
| Tissue | nTPM | level |
|---|---|---|
| Brain | 12.5 | Medium |
| Cerebellum | 15.3 | Medium |
| Skin | 8.2 | Low |
| Lung | 6.1 | Low |
| Testis | 18.7 | Medium |
| Kidney | 9.4 | Low |
Cell Line Expression
| Cell Line | nTPM | Notes |
|---|---|---|
| HEK 293 | 14.2 | Embryonic kidney |
| HeLa | 11.8 | Cervical carcinoma |
| A549 | 9.5 | Lung carcinoma |
| MCF7 | 7.3 | Breast carcinoma |
| U2OS | 10.1 | Osteosarcoma |
Data source:Human Protein Atlas(proteinatlas.org)
Mutations & Variants
Hotspot Mutations
| Variant | Type | Frequency | Functional Description |
|---|---|---|---|
| c.1022G>A (p.Trp341*) | Nonsense | <1% | Loss of function; truncation |
| c.1274T>C (p.Leu425Pro) | Missense | <1% | Loss of function; impaired GLI binding |
| c.1A>G (p.Met1?) | Start loss | <1% | Loss of function; no protein |
| c.1342C>T (p.Arg448*) | Nonsense | <1% | Loss of function; truncation |
Mutation functional classification
Loss of Function (LOF)
Most SUFU mutations are loss-of-function (nonsense, frameshift, splice-site, missense) that impair GLI binding or protein stability, leading to constitutive Hedgehog signaling.
Gain of Function (GOF)
No gain-of-function mutations reported in SUFU.
Dominant Negative (DN)
Some missense mutations (e.g., p.Leu425Pro) may act as dominant-negative by sequestering wild-type SUFU or GLI, but evidence is limited.
View complete mutation data:
Gene Ontology (GO)
Pathways
• Hedgehog signaling pathway (Reactome: R-HSA-5358351)
• GLI protein processing (Reactome: R-HSA-5610785)
• Signaling by Hedgehog (Reactome: R-HSA-5358346)
Protein Summary
SUFU is a 484-amino-acid protein that acts as a scaffold in the Hedgehog pathway. It directly binds GLI transcription factors (GLI1, GLI2, GLI3) and recruits protein kinases (e.g., PKA, GSK3β, CK1) to promote GLI phosphorylation and proteasomal processing. In the absence of Hh ligand, SUFU retains GLI in the cytoplasm and facilitates its conversion to repressor forms. Upon Hh stimulation, SUFU dissociates from GLI, allowing GLI activators to enter the nucleus. SUFU also localizes to the primary cilium, where it modulates signal transduction. Loss of SUFU function mimics Hh pathway activation and drives tumorigenesis.
Related Services
Related Products
| Product name | Cat.No. | Species | Gene ID | |
|---|---|---|---|---|
| SUFU Knockout HEK293 Cell Line | EDJ-KQ915 | Human | 51684 | Details Get a Quote |
| SUFU Knockout A-549 Cell Line | EDJ-KQ19771 | Human | 51684 | Details Get a Quote |
| SUFU Knockout HCT 116 Cell Line | EDJ-KQ19772 | Human | 51684 | Details Get a Quote |
| SUFU Knockout HeLa Cell Line | EDJ-KQ19773 | Human | 51684 | Details Get a Quote |
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