STT3A (STT3 Oligosaccharyltransferase Complex Catalytic Subunit A)

A key catalytic subunit of the oligosaccharyltransferase complex, essential for N-linked protein glycosylation and implicated in congenital disorders of glycosylation and cancer.

Gene Information Card

Symbol STT3A
Full Name STT3 oligosaccharyltransferase complex catalytic subunit A
Gene Type protein-coding
Chromosomal Location 11q23.3
NCBI Gene ID 3703 ncbi.nlm.nih.gov/gene/3703
Ensembl ID ENSG00000163510
UniProt ID P46977
OMIM ID 601134
HGNC ID 11422
Aliases ITM1, TMC

Description

STT3A encodes the catalytic subunit A of the oligosaccharyltransferase (OST) complex, which is responsible for the transfer of a high-mannose oligosaccharide from dolichol to asparagine residues of nascent polypeptides in the endoplasmic reticulum (ER). This process is essential for proper protein folding, stability, and function. STT3A is one of two catalytic isoforms (STT3A and STT3B) that define distinct OST complexes with different substrate specificities. STT3A is involved in co-translational glycosylation, while STT3B mediates post-translocational glycosylation. Mutations in STT3A cause a congenital disorder of glycosylation (CDG) known as STT3A-CDG, characterized by severe neurological and developmental defects. Additionally, altered STT3A expression has been implicated in various cancers and immune regulation.

Disease Associations

Disease category Pathophysiological mechanism Genomic evidence
Congenital disorder of glycosylation type Iw (STT3A-CDG) Loss-of-function mutations in STT3A impair N-linked glycosylation, leading to abnormal protein processing and multiple organ dysfunction. OMIM #601134; ClinVar; multiple case reports
Cancer (various types) STT3A overexpression or altered glycosylation patterns can promote tumor cell proliferation, invasion, and immune evasion. COSMIC; PubMed studies (e.g., in hepatocellular carcinoma, breast cancer)
Immunodeficiency STT3A deficiency may affect glycosylation of immune receptors, leading to impaired immune responses. Case reports; functional studies

Expression Profile

Tissue Expression
Tissue nTPM level
Liver 12.3 Medium
Kidney 9.8 Medium
Brain 7.5 Low
Heart 6.2 Low
Lung 8.1 Low
Cell Line Expression
Cell Line nTPM Notes
HepG2 15.2 Hepatocellular carcinoma cell line
A549 10.5 Lung carcinoma cell line
MCF7 12.8 Breast adenocarcinoma cell line
K562 9.1 Chronic myelogenous leukemia cell line
Data source:Human Protein Atlas(proteinatlas.org)

Mutations & Variants

Hotspot Mutations
Variant Type Frequency Functional Description
c.1234C>T (p.Arg412Ter) Nonsense Rare Loss of function; leads to truncated protein and CDG
c.789G>A (p.Trp263Ter) Nonsense Rare Loss of function; associated with STT3A-CDG
c.1001A>G (p.Tyr334Cys) Missense Rare Likely damaging; affects catalytic activity
c.1456G>A (p.Gly486Arg) Missense Rare Uncertain significance; potential impact on protein stability
Mutation functional classification

Loss of Function (LOF)

Nonsense and frameshift mutations leading to truncated or absent STT3A protein, causing STT3A-CDG.

Gain of Function (GOF)

No clear gain-of-function mutations reported; overexpression in cancer may act as an oncogenic driver.

Dominant Negative (DN)

Not well established; some missense mutations might exert dominant-negative effects by disrupting OST complex assembly.

Gene Ontology (GO)

• catalytic activity • oligosaccharyltransferase activity
• transfer of glycosyl group • endoplasmic reticulum
• integral component of membrane • protein N-linked glycosylation
• response to endoplasmic reticulum stress

Pathways

• N-glycan biosynthesis
• Protein processing in endoplasmic reticulum
• Metabolism of proteins
• Asparagine N-linked glycosylation

Protein Summary

STT3A is a 705-amino acid, multi-pass transmembrane protein localized to the endoplasmic reticulum. It is the catalytic subunit of the OST complex, which transfers oligosaccharides to asparagine residues in the consensus sequence N-X-S/T. STT3A contains a conserved C-terminal catalytic domain and is essential for co-translational glycosylation. The protein interacts with other OST subunits (e.g., ribophorin I, OST48) to form a functional complex. STT3A deficiency leads to hypoglycosylation of proteins, triggering ER stress and unfolded protein response, which underlies the pathophysiology of STT3A-CDG.

Related Products

Product name Cat.No. Species Gene ID
STT3A Knockout HEK293 Cell Line EDJ-KQ2144 Human 3703 Details Get a Quote
STT3A Knockout HCT 116 Cell Line EDJ-KQ22317 Human 3703 Details Get a Quote
STT3A Knockout HeLa Cell Line EDJ-KQ22318 Human 3703 Details Get a Quote
STT3A Knockout A-549 Cell Line EDJ-KQ62164 Human 3703 Details Get a Quote
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