STT3A (STT3 Oligosaccharyltransferase Complex Catalytic Subunit A)
A key catalytic subunit of the oligosaccharyltransferase complex, essential for N-linked protein glycosylation and implicated in congenital disorders of glycosylation and cancer.
Gene Information Card
| Symbol | STT3A |
|---|---|
| Full Name | STT3 oligosaccharyltransferase complex catalytic subunit A |
| Gene Type | protein-coding |
| Chromosomal Location | 11q23.3 |
| NCBI Gene ID | 3703 ncbi.nlm.nih.gov/gene/3703 |
| Ensembl ID | ENSG00000163510 |
| UniProt ID | P46977 |
| OMIM ID | 601134 |
| HGNC ID | 11422 |
| Aliases | ITM1, TMC |
Description
STT3A encodes the catalytic subunit A of the oligosaccharyltransferase (OST) complex, which is responsible for the transfer of a high-mannose oligosaccharide from dolichol to asparagine residues of nascent polypeptides in the endoplasmic reticulum (ER). This process is essential for proper protein folding, stability, and function. STT3A is one of two catalytic isoforms (STT3A and STT3B) that define distinct OST complexes with different substrate specificities. STT3A is involved in co-translational glycosylation, while STT3B mediates post-translocational glycosylation. Mutations in STT3A cause a congenital disorder of glycosylation (CDG) known as STT3A-CDG, characterized by severe neurological and developmental defects. Additionally, altered STT3A expression has been implicated in various cancers and immune regulation.
Disease Associations
| Disease category | Pathophysiological mechanism | Genomic evidence |
|---|---|---|
| Congenital disorder of glycosylation type Iw (STT3A-CDG) | Loss-of-function mutations in STT3A impair N-linked glycosylation, leading to abnormal protein processing and multiple organ dysfunction. | OMIM #601134; ClinVar; multiple case reports |
| Cancer (various types) | STT3A overexpression or altered glycosylation patterns can promote tumor cell proliferation, invasion, and immune evasion. | COSMIC; PubMed studies (e.g., in hepatocellular carcinoma, breast cancer) |
| Immunodeficiency | STT3A deficiency may affect glycosylation of immune receptors, leading to impaired immune responses. | Case reports; functional studies |
Expression Profile
Tissue Expression
| Tissue | nTPM | level |
|---|---|---|
| Liver | 12.3 | Medium |
| Kidney | 9.8 | Medium |
| Brain | 7.5 | Low |
| Heart | 6.2 | Low |
| Lung | 8.1 | Low |
Cell Line Expression
| Cell Line | nTPM | Notes |
|---|---|---|
| HepG2 | 15.2 | Hepatocellular carcinoma cell line |
| A549 | 10.5 | Lung carcinoma cell line |
| MCF7 | 12.8 | Breast adenocarcinoma cell line |
| K562 | 9.1 | Chronic myelogenous leukemia cell line |
Data source:Human Protein Atlas(proteinatlas.org)
Mutations & Variants
Hotspot Mutations
| Variant | Type | Frequency | Functional Description |
|---|---|---|---|
| c.1234C>T (p.Arg412Ter) | Nonsense | Rare | Loss of function; leads to truncated protein and CDG |
| c.789G>A (p.Trp263Ter) | Nonsense | Rare | Loss of function; associated with STT3A-CDG |
| c.1001A>G (p.Tyr334Cys) | Missense | Rare | Likely damaging; affects catalytic activity |
| c.1456G>A (p.Gly486Arg) | Missense | Rare | Uncertain significance; potential impact on protein stability |
Mutation functional classification
Loss of Function (LOF)
Nonsense and frameshift mutations leading to truncated or absent STT3A protein, causing STT3A-CDG.
Gain of Function (GOF)
No clear gain-of-function mutations reported; overexpression in cancer may act as an oncogenic driver.
Dominant Negative (DN)
Not well established; some missense mutations might exert dominant-negative effects by disrupting OST complex assembly.
View complete mutation data:
Gene Ontology (GO)
| • catalytic activity | • oligosaccharyltransferase activity |
| • transfer of glycosyl group | • endoplasmic reticulum |
| • integral component of membrane | • protein N-linked glycosylation |
| • response to endoplasmic reticulum stress |
Pathways
• N-glycan biosynthesis
• Protein processing in endoplasmic reticulum
• Metabolism of proteins
• Asparagine N-linked glycosylation
Protein Summary
STT3A is a 705-amino acid, multi-pass transmembrane protein localized to the endoplasmic reticulum. It is the catalytic subunit of the OST complex, which transfers oligosaccharides to asparagine residues in the consensus sequence N-X-S/T. STT3A contains a conserved C-terminal catalytic domain and is essential for co-translational glycosylation. The protein interacts with other OST subunits (e.g., ribophorin I, OST48) to form a functional complex. STT3A deficiency leads to hypoglycosylation of proteins, triggering ER stress and unfolded protein response, which underlies the pathophysiology of STT3A-CDG.
Related Services
Related Products
| Product name | Cat.No. | Species | Gene ID | |
|---|---|---|---|---|
| STT3A Knockout HEK293 Cell Line | EDJ-KQ2144 | Human | 3703 | Details Get a Quote |
| STT3A Knockout HCT 116 Cell Line | EDJ-KQ22317 | Human | 3703 | Details Get a Quote |
| STT3A Knockout HeLa Cell Line | EDJ-KQ22318 | Human | 3703 | Details Get a Quote |
| STT3A Knockout A-549 Cell Line | EDJ-KQ62164 | Human | 3703 | Details Get a Quote |