SLC35A5 Gene - Solute Carrier Family 35 Member A5
Comprehensive genomic and proteomic information for SLC35A5, a member of the solute carrier family 35, with implications in nucleotide sugar transport and potential roles in disease.
Gene Information Card
| Symbol | SLC35A5 |
|---|---|
| Full Name | solute carrier family 35 member A5 |
| Gene Type | gene with protein product |
| Chromosomal Location | 3q13.2 |
| NCBI Gene ID | 55032 ncbi.nlm.nih.gov/gene/55032 |
| Ensembl ID | ENSG00000138459 |
| UniProt ID | Q9BS91 |
| OMIM ID | 620298 |
| HGNC ID | HGNC:20792 |
| Aliases | FLJ20730 |
Description
SLC35A5 encodes a member of the solute carrier family 35 (SLC35), which are nucleotide sugar transporters localized to the Golgi apparatus and endoplasmic reticulum. These transporters are essential for glycosylation processes by importing nucleotide sugars into the lumen of these organelles. SLC35A5 is predicted to be a multi-pass membrane protein with 10 transmembrane domains. It is widely expressed in various tissues, with higher expression in the thyroid, adrenal gland, and salivary gland. The protein may play a role in the transport of UDP-glucuronic acid and other nucleotide sugars, contributing to the synthesis of glycosaminoglycans and glycoproteins. Mutations in SLC35A5 have been associated with intellectual disability and other neurodevelopmental disorders, suggesting its importance in normal development.
Disease Associations
| Disease category | Pathophysiological mechanism | Genomic evidence |
|---|---|---|
| Intellectual disability | Loss-of-function mutations impair nucleotide sugar transport, affecting glycosylation in neurons. | ClinVar and literature reports |
| Neurodevelopmental disorder with speech delay and dysmorphic facies | Biallelic mutations lead to reduced protein function, disrupting glycoprotein processing in the brain. | OMIM and case studies |
Expression Profile
Tissue Expression
| Tissue | nTPM | level |
|---|---|---|
| Thyroid | 20.1 | High |
| Adrenal gland | 15.3 | High |
| Salivary gland | 12.8 | High |
| Kidney | 8.2 | Medium |
| Liver | 6.5 | Medium |
| Brain | 4.1 | Low |
Cell Line Expression
| Cell Line | nTPM | Notes |
|---|---|---|
| HEK 293 | 12.5 | Moderate expression |
| HeLa | 9.8 | Moderate expression |
| HepG2 | 7.3 | Low expression |
| K562 | 5.6 | Low expression |
Data source:Human Protein Atlas(proteinatlas.org)
Mutations & Variants
Hotspot Mutations
| Variant | Type | Frequency | Functional Description |
|---|---|---|---|
| c.679C>T (p.Arg227*) | Nonsense | Rare | Loss of function |
| c.1042G>A (p.Gly348Arg) | Missense | Rare | Likely loss of function |
| c.1255delC (p.Leu419Trpfs*13) | Frameshift | Rare | Loss of function |
Mutation functional classification
Loss of Function (LOF)
Most pathogenic mutations are loss-of-function, leading to reduced or absent protein activity.
Gain of Function (GOF)
No evidence of gain-of-function mutations.
Dominant Negative (DN)
No evidence of dominant-negative effects.
View complete mutation data:
Gene Ontology (GO)
| • nucleotide-sugar transmembrane transporter activity | • Golgi membrane |
| • integral component of membrane | • transport |
Pathways
• Nucleotide sugar transport
• Glycosylation
Protein Summary
The SLC35A5 protein is a putative nucleotide sugar transporter with 10 transmembrane domains. It is localized to the Golgi apparatus and is involved in the transport of nucleotide sugars, such as UDP-glucuronic acid, into the Golgi lumen for glycosylation reactions. The protein is widely expressed, with high levels in thyroid, adrenal, and salivary glands. Mutations in SLC35A5 are associated with neurodevelopmental disorders, indicating its critical role in brain development.
Related Services
Related Products
| Product name | Cat.No. | Species | Gene ID | |
|---|---|---|---|---|
| SLC35A5 Knockout HEK293 Cell Line | EDC08375 | Human | 55032 | Details Get a Quote |
| SLC35A5 Knockout HCT 116 Cell Line | EDJ-KQ46038 | Human | 55032 | Details Get a Quote |
| SLC35A5 Knockout HeLa Cell Line | EDJ-KQ46039 | Human | 55032 | Details Get a Quote |
| SLC35A5 Knockout A-549 Cell Line | EDJ-KQ44818 | Human | 55032 | Details Get a Quote |