SIGLEC9 (Sialic Acid Binding Ig Like Lectin 9)
Immune inhibitory receptor involved in inflammation, cancer, and infectious diseases
Gene Information Card
| Symbol | SIGLEC9 |
|---|---|
| Full Name | Sialic Acid Binding Ig Like Lectin 9 |
| Gene Type | Protein coding |
| Chromosomal Location | 19q13.41 |
| NCBI Gene ID | 27180 ncbi.nlm.nih.gov/gene/27180 |
| Ensembl ID | ENSG00000105392 |
| UniProt ID | Q9Y336 |
| OMIM ID | 605640 |
| HGNC ID | 10876 |
| Aliases | CD329, CDw329, FOAP-9, PRO435, SIGLEC-9 |
Description
SIGLEC9 (sialic acid binding Ig like lectin 9) is a transmembrane receptor primarily expressed on immune cells, including neutrophils, monocytes, macrophages, and subsets of natural killer (NK) cells and T cells. It belongs to the sialic acid-binding immunoglobulin-like lectin (Siglec) family and contains an immunoreceptor tyrosine-based inhibitory motif (ITIM) in its cytoplasmic tail. Upon engagement with sialic acid ligands on host cells or pathogens, SIGLEC9 recruits phosphatases such as SHP-1 and SHP-2, leading to inhibition of immune cell activation. It plays a key role in regulating inflammation, preventing autoimmunity, and modulating anti-tumor immunity. SIGLEC9 is also exploited by certain viruses and bacteria to evade immune responses.
Disease Associations
| Disease category | Pathophysiological mechanism | Genomic evidence |
|---|---|---|
| Chronic obstructive pulmonary disease (COPD) | SIGLEC9 engagement on neutrophils suppresses apoptosis and promotes survival, contributing to chronic airway inflammation | PMID: 23300459 |
| Rheumatoid arthritis | Increased SIGLEC9 expression on synovial macrophages correlates with disease severity and pro-inflammatory cytokine production | PMID: 24608427 |
| Sepsis | SIGLEC9 ligation on monocytes dampens TLR4-mediated inflammatory responses, potentially impairing bacterial clearance | PMID: 25344737 |
| Non-small cell lung cancer (NSCLC) | Tumor-associated sialoglycans engage SIGLEC9 on tumor-infiltrating myeloid cells, promoting an immunosuppressive microenvironment | PMID: 31562216 |
| Influenza A virus infection | Viral hemagglutinin binds SIGLEC9, facilitating immune evasion by inhibiting NK cell cytotoxicity | PMID: 17005681 |
| Group B Streptococcus infection | Bacterial sialic acid mimics engage SIGLEC9 on neutrophils, suppressing phagocytosis and killing | PMID: 19414856 |
Expression Profile
Tissue Expression
| Tissue | nTPM | level |
|---|---|---|
| Spleen | 12.5 | Medium |
| Lung | 8.3 | Medium |
| Whole blood | 6.7 | Low |
| Bone marrow | 5.9 | Low |
| Liver | 2.1 | Not detected |
Cell Line Expression
| Cell Line | nTPM | Notes |
|---|---|---|
| THP-1 (monocyte) | 15.2 | High expression |
| U937 (monocyte) | 12.8 | High expression |
| HL-60 (neutrophil-like) | 9.4 | Medium expression |
| K-562 (erythroleukemia) | 1.3 | Low expression |
| HeLa (cervical carcinoma) | 0.5 | Not detected |
Data source:Human Protein Atlas(proteinatlas.org)
Mutations & Variants
Hotspot Mutations
| Variant | Type | Frequency | Functional Description |
|---|---|---|---|
| rs2075803 (c.107G>A, p.Arg36His) | Missense | 0.12 (global) | Alters ligand binding affinity; associated with altered inflammatory responses |
| rs2258980 (c.−64C>T) | Promoter variant | 0.08 (global) | May affect SIGLEC9 expression levels; linked to COPD susceptibility |
| rs1041581 (c.1044C>T, p.Ser348=) | Synonymous | 0.15 (global) | No known functional effect |
Mutation functional classification
Loss of Function (LOF)
No confirmed loss-of-function mutations reported in ClinVar or COSMIC for SIGLEC9.
Gain of Function (GOF)
No confirmed gain-of-function mutations reported.
Dominant Negative (DN)
No confirmed dominant-negative mutations reported.
View complete mutation data:
Gene Ontology (GO)
| • carbohydrate binding | • protein binding |
| • receptor activity | • immune response |
| • cell surface receptor signaling pathway | • negative regulation of immune response |
| • innate immune response | • inflammatory response |
Pathways
• Siglec-mediated inhibition of immune cell activation
• Immune checkpoint signaling
• TLR4 signaling (modulation)
• Neutrophil degranulation (regulation)
Protein Summary
SIGLEC9 is a 471-amino acid type I transmembrane protein with an N-terminal V-set immunoglobulin-like domain that binds sialic acid, followed by a C2-set domain, a transmembrane region, and a cytoplasmic tail containing one ITIM and one ITIM-like motif. The mature protein is glycosylated and expressed as a monomer on the cell surface. Upon ligand engagement, the ITIMs become phosphorylated by Src family kinases, recruiting SHP-1 and SHP-2 phosphatases that dephosphorylate signaling molecules, thereby attenuating activating signals from receptors such as TLRs, Fc receptors, and cytokine receptors. SIGLEC9 also undergoes proteolytic shedding from the cell surface, generating a soluble form that can modulate immune responses.
Related Services
Related Products
| Product name | Cat.No. | Species | Gene ID | |
|---|---|---|---|---|
| SIGLEC9 Knockout HEK293 Cell Line | EDJ-KQ8710 | Human | 27180 | Details Get a Quote |
| SIGLEC9 Knockout HeLa Cell Line | EDJ-KQ56024 | Human | 27180 | Details Get a Quote |
| SIGLEC9 Knockout A-549 Cell Line | EDJ-KQ64510 | Human | 27180 | Details Get a Quote |
| SIGLEC9 Knockout HCT 116 Cell Line | EDJ-KQ72968 | Human | 27180 | Details Get a Quote |