SIGLEC9 (Sialic Acid Binding Ig Like Lectin 9)

Immune inhibitory receptor involved in inflammation, cancer, and infectious diseases

Gene Information Card

Symbol SIGLEC9
Full Name Sialic Acid Binding Ig Like Lectin 9
Gene Type Protein coding
Chromosomal Location 19q13.41
NCBI Gene ID 27180 ncbi.nlm.nih.gov/gene/27180
Ensembl ID ENSG00000105392
UniProt ID Q9Y336
OMIM ID 605640
HGNC ID 10876
Aliases CD329, CDw329, FOAP-9, PRO435, SIGLEC-9

Description

SIGLEC9 (sialic acid binding Ig like lectin 9) is a transmembrane receptor primarily expressed on immune cells, including neutrophils, monocytes, macrophages, and subsets of natural killer (NK) cells and T cells. It belongs to the sialic acid-binding immunoglobulin-like lectin (Siglec) family and contains an immunoreceptor tyrosine-based inhibitory motif (ITIM) in its cytoplasmic tail. Upon engagement with sialic acid ligands on host cells or pathogens, SIGLEC9 recruits phosphatases such as SHP-1 and SHP-2, leading to inhibition of immune cell activation. It plays a key role in regulating inflammation, preventing autoimmunity, and modulating anti-tumor immunity. SIGLEC9 is also exploited by certain viruses and bacteria to evade immune responses.

Disease Associations

Disease category Pathophysiological mechanism Genomic evidence
Chronic obstructive pulmonary disease (COPD) SIGLEC9 engagement on neutrophils suppresses apoptosis and promotes survival, contributing to chronic airway inflammation PMID: 23300459
Rheumatoid arthritis Increased SIGLEC9 expression on synovial macrophages correlates with disease severity and pro-inflammatory cytokine production PMID: 24608427
Sepsis SIGLEC9 ligation on monocytes dampens TLR4-mediated inflammatory responses, potentially impairing bacterial clearance PMID: 25344737
Non-small cell lung cancer (NSCLC) Tumor-associated sialoglycans engage SIGLEC9 on tumor-infiltrating myeloid cells, promoting an immunosuppressive microenvironment PMID: 31562216
Influenza A virus infection Viral hemagglutinin binds SIGLEC9, facilitating immune evasion by inhibiting NK cell cytotoxicity PMID: 17005681
Group B Streptococcus infection Bacterial sialic acid mimics engage SIGLEC9 on neutrophils, suppressing phagocytosis and killing PMID: 19414856

Expression Profile

Tissue Expression
Tissue nTPM level
Spleen 12.5 Medium
Lung 8.3 Medium
Whole blood 6.7 Low
Bone marrow 5.9 Low
Liver 2.1 Not detected
Cell Line Expression
Cell Line nTPM Notes
THP-1 (monocyte) 15.2 High expression
U937 (monocyte) 12.8 High expression
HL-60 (neutrophil-like) 9.4 Medium expression
K-562 (erythroleukemia) 1.3 Low expression
HeLa (cervical carcinoma) 0.5 Not detected
Data source:Human Protein Atlas(proteinatlas.org)

Mutations & Variants

Hotspot Mutations
Variant Type Frequency Functional Description
rs2075803 (c.107G>A, p.Arg36His) Missense 0.12 (global) Alters ligand binding affinity; associated with altered inflammatory responses
rs2258980 (c.−64C>T) Promoter variant 0.08 (global) May affect SIGLEC9 expression levels; linked to COPD susceptibility
rs1041581 (c.1044C>T, p.Ser348=) Synonymous 0.15 (global) No known functional effect
Mutation functional classification

Loss of Function (LOF)

No confirmed loss-of-function mutations reported in ClinVar or COSMIC for SIGLEC9.

Gain of Function (GOF)

No confirmed gain-of-function mutations reported.

Dominant Negative (DN)

No confirmed dominant-negative mutations reported.

Gene Ontology (GO)

• carbohydrate binding • protein binding
• receptor activity • immune response
• cell surface receptor signaling pathway • negative regulation of immune response
• innate immune response • inflammatory response

Pathways

• Siglec-mediated inhibition of immune cell activation
• Immune checkpoint signaling
• TLR4 signaling (modulation)
• Neutrophil degranulation (regulation)

Protein Summary

SIGLEC9 is a 471-amino acid type I transmembrane protein with an N-terminal V-set immunoglobulin-like domain that binds sialic acid, followed by a C2-set domain, a transmembrane region, and a cytoplasmic tail containing one ITIM and one ITIM-like motif. The mature protein is glycosylated and expressed as a monomer on the cell surface. Upon ligand engagement, the ITIMs become phosphorylated by Src family kinases, recruiting SHP-1 and SHP-2 phosphatases that dephosphorylate signaling molecules, thereby attenuating activating signals from receptors such as TLRs, Fc receptors, and cytokine receptors. SIGLEC9 also undergoes proteolytic shedding from the cell surface, generating a soluble form that can modulate immune responses.

Related Products

Product name Cat.No. Species Gene ID
SIGLEC9 Knockout HEK293 Cell Line EDJ-KQ8710 Human 27180 Details Get a Quote
SIGLEC9 Knockout HeLa Cell Line EDJ-KQ56024 Human 27180 Details Get a Quote
SIGLEC9 Knockout A-549 Cell Line EDJ-KQ64510 Human 27180 Details Get a Quote
SIGLEC9 Knockout HCT 116 Cell Line EDJ-KQ72968 Human 27180 Details Get a Quote
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