SAA1: Serum Amyloid A1 – Acute Phase Protein and Amyloidosis Marker
Comprehensive genomic and proteomic analysis of SAA1, a key acute-phase reactant involved in amyloid A amyloidosis and inflammatory disorders.
Gene Information Card
| Symbol | SAA1 |
|---|---|
| Full Name | Serum Amyloid A1 |
| Gene Type | Protein coding |
| Chromosomal Location | 11p15.1 |
| NCBI Gene ID | 6288 ncbi.nlm.nih.gov/gene/6288 |
| Ensembl ID | ENSG00000173432 |
| UniProt ID | P0DJI8 |
| OMIM ID | 104750 |
| HGNC ID | 10513 |
| Aliases | SAA, PIG4, TP53I4 |
Description
SAA1 (Serum Amyloid A1) encodes a major acute-phase protein, serum amyloid A (SAA), which is primarily synthesized by the liver in response to inflammation, infection, or tissue injury. SAA1 is a precursor of amyloid A (AA) fibrils that deposit in tissues, leading to secondary (AA) amyloidosis. The protein also plays roles in lipid metabolism, chemotaxis, and immune modulation. Polymorphisms in SAA1 are associated with susceptibility to amyloidosis and inflammatory diseases.
Disease Associations
| Disease category | Pathophysiological mechanism | Genomic evidence |
|---|---|---|
| Amyloid A (AA) amyloidosis | Deposition of SAA1-derived amyloid fibrils in kidneys, liver, and spleen, leading to organ dysfunction. | ClinVar, OMIM |
| Familial Mediterranean fever (FMF) | SAA1 polymorphisms (e.g., rs1136743) modify risk of AA amyloidosis in FMF patients. | OMIM, NCBI |
| Rheumatoid arthritis | Elevated SAA1 levels contribute to chronic inflammation and amyloid deposition. | NCBI, ClinVar |
| Atherosclerosis | SAA1 modulates HDL metabolism and promotes vascular inflammation. | UniProt, NCBI |
Expression Profile
Tissue Expression
| Tissue | nTPM | level |
|---|---|---|
| Liver | 1245.3 | High |
| Adipose tissue | 45.2 | Medium |
| Lung | 12.8 | Low |
| Kidney | 8.5 | Low |
| Spleen | 6.1 | Low |
Cell Line Expression
| Cell Line | nTPM | Notes |
|---|---|---|
| HepG2 | 1560.0 | Hepatocellular carcinoma cell line; high SAA1 expression |
| THP-1 | 320.0 | Monocytic cell line; induced by LPS |
| A549 | 15.0 | Lung carcinoma cell line; low basal expression |
Data source:Human Protein Atlas(proteinatlas.org)
Mutations & Variants
Hotspot Mutations
| Variant | Type | Frequency | Functional Description |
|---|---|---|---|
| rs1136743 (c.2995C>T) | SNP | 0.35 (East Asian) | Associated with increased risk of AA amyloidosis |
| rs4638289 (c.3010G>A) | SNP | 0.12 (European) | Modifies SAA1 expression levels |
| c.194C>T (p.Ala65Val) | Missense | <0.01 | Rare variant; potential effect on protein stability |
Mutation functional classification
Loss of Function (LOF)
No well-characterized loss-of-function mutations reported; SAA1 is essential for acute-phase response.
Gain of Function (GOF)
Polymorphisms such as rs1136743 may increase SAA1 production, promoting amyloid deposition.
Dominant Negative (DN)
Not described for SAA1.
View complete mutation data:
Gene Ontology (GO)
Pathways
• Acute phase response (Reactome: R-HSA-6785807)
• IL-6 signaling (KEGG: hsa04630)
• Lipid metabolism and HDL remodeling (Reactome: R-HSA-8963896)
Protein Summary
Serum amyloid A1 (SAA1) is a 122-amino acid secreted protein (12.5 kDa) that circulates as a component of high-density lipoprotein (HDL) during acute inflammation. It is predominantly produced by hepatocytes under transcriptional control of IL-1, IL-6, and TNF-α. SAA1 has multiple functions: it acts as a chemoattractant for immune cells, modulates cholesterol transport, and can form amyloid fibrils in chronic inflammatory states. The protein structure includes an N-terminal region critical for amyloidogenesis. SAA1 polymorphisms influence susceptibility to AA amyloidosis, particularly in patients with chronic inflammatory diseases such as rheumatoid arthritis and familial Mediterranean fever.
Related Services
Related Products
| Product name | Cat.No. | Species | Gene ID | |
|---|---|---|---|---|
| SAA1 Knockout HEK293 Cell Line | EDJ-KQ50604 | Human | 6288 | Details Get a Quote |
| SAA1 Knockout HeLa Cell Line | EDJ-KQ54384 | Human | 6288 | Details Get a Quote |
| SAA1 Knockout A-549 Cell Line | EDJ-KQ62877 | Human | 6288 | Details Get a Quote |
| SAA1 Knockout HCT 116 Cell Line | EDJ-KQ71343 | Human | 6288 | Details Get a Quote |