RUFY1: RUN and FYVE Domain Containing 1
A key regulator of endosomal trafficking and autophagy
Gene Information Card
| Symbol | RUFY1 |
|---|---|
| Full Name | RUN and FYVE domain containing 1 |
| Gene Type | protein-coding |
| Chromosomal Location | 5q35.3 |
| NCBI Gene ID | 80230 ncbi.nlm.nih.gov/gene/80230 |
| Ensembl ID | ENSG00000113522 |
| UniProt ID | Q96T51 |
| OMIM ID | 610327 |
| HGNC ID | 29191 |
| Aliases | ZFYVE12, RABIP4, FIP4 |
Description
RUFY1 (RUN and FYVE domain containing 1) encodes a protein that localizes to early endosomes and plays a critical role in endosomal trafficking, particularly in the recycling of endocytosed receptors and in the regulation of autophagy. The protein contains an N-terminal RUN domain and a C-terminal FYVE domain, which mediate interactions with small GTPases and phosphatidylinositol 3-phosphate, respectively. RUFY1 is involved in the formation of endosomal tubules and the sorting of cargo for recycling or degradation.
Disease Associations
| Disease category | Pathophysiological mechanism | Genomic evidence |
|---|---|---|
| Cancer (various types) | Altered expression may affect endosomal signaling and autophagy, contributing to tumor progression. | COSMIC; literature |
| Neurodegenerative disorders | Dysregulation of autophagy and endosomal trafficking linked to RUFY1 dysfunction. | Literature |
Expression Profile
Tissue Expression
| Tissue | nTPM | level |
|---|---|---|
| Brain | 15.2 | Medium |
| Lung | 12.8 | Medium |
| Liver | 8.5 | Low |
| Kidney | 11.3 | Medium |
| Testis | 20.1 | High |
Cell Line Expression
| Cell Line | nTPM | Notes |
|---|---|---|
| HeLa | 14.5 | Cervical cancer cell line |
| HEK293 | 12.0 | Embryonic kidney cell line |
| A549 | 10.3 | Lung cancer cell line |
| MCF7 | 9.8 | Breast cancer cell line |
Data source:Human Protein Atlas(proteinatlas.org)
Mutations & Variants
Hotspot Mutations
| Variant | Type | Frequency | Functional Description |
|---|---|---|---|
| c.1015C>T (p.Arg339Trp) | Missense | <0.01% | Unknown functional effect |
| c.1246G>A (p.Gly416Arg) | Missense | <0.01% | Unknown functional effect |
Mutation functional classification
Loss of Function (LOF)
Not well characterized; potential disruption of endosomal trafficking.
Gain of Function (GOF)
Not reported.
Dominant Negative (DN)
Not reported.
View complete mutation data:
Gene Ontology (GO)
| • endosome | • early endosome |
| • endosomal transport | • autophagy |
| • protein transport | • FYVE domain binding |
| • RUN domain binding | • phosphatidylinositol-3-phosphate binding |
Pathways
• Endosomal recycling
• Autophagy
• EGFR signaling
Protein Summary
The RUFY1 protein is a 647-amino acid protein with a molecular weight of approximately 73 kDa. It contains an N-terminal RUN domain (residues 1-150) that interacts with Rab GTPases and a C-terminal FYVE domain (residues 550-600) that binds phosphatidylinositol 3-phosphate, targeting the protein to early endosomes. RUFY1 functions as a scaffold to regulate endosomal tubulation and cargo sorting, and it is implicated in the maturation of autophagosomes.
Related Services
Related Products
| Product name | Cat.No. | Species | Gene ID | |
|---|---|---|---|---|
| RUFY1 Knockout HEK293 Cell Line | EDJ-KQ9501 | Human | 80230 | Details Get a Quote |
| RUFY1 Knockout HeLa Cell Line | EDJ-KQ34992 | Human | 80230 | Details Get a Quote |
| RUFY1 Knockout A-549 Cell Line | EDJ-KQ36245 | Human | 80230 | Details Get a Quote |
| RUFY1 Knockout HCT 116 Cell Line | EDJ-KQ36246 | Human | 80230 | Details Get a Quote |