RORB Gene - Retinoic Acid Receptor-Related Orphan Receptor Beta
Nuclear receptor involved in circadian rhythm, neurodevelopment, and cancer
Gene Information Card
| Symbol | RORB |
|---|---|
| Full Name | RAR-related orphan receptor B |
| Gene Type | protein-coding |
| Chromosomal Location | 9q22.31 |
| NCBI Gene ID | 6096 ncbi.nlm.nih.gov/gene/6096 |
| Ensembl ID | ENSG00000198963 |
| UniProt ID | Q92753 |
| OMIM ID | 601972 |
| HGNC ID | 10259 |
| Aliases | NR1F2, RZRB, ROR-BETA |
Description
RORB encodes a member of the NR1 subfamily of nuclear hormone receptors, the retinoic acid receptor-related orphan receptor beta. This protein functions as a ligand-dependent transcription factor, binding as a monomer to ROR response elements (ROREs) in target gene promoters. RORB is critical for circadian rhythm regulation, neurodevelopment, and sensory processing. It is expressed in the brain, retina, and pineal gland. Dysregulation of RORB is implicated in epilepsy, intellectual disability, and certain cancers.
Disease Associations
| Disease category | Pathophysiological mechanism | Genomic evidence |
|---|---|---|
| Epilepsy, idiopathic generalized, susceptibility to | Altered RORB expression disrupts neuronal excitability and circadian regulation | ClinVar, OMIM |
| Intellectual disability | Loss-of-function mutations impair neurodevelopmental transcriptional programs | ClinVar, OMIM |
| Breast cancer | RORB promoter hypermethylation leads to reduced expression, promoting tumorigenesis | COSMIC, NCBI |
| Colorectal cancer | RORB downregulation associated with poor prognosis and metastasis | COSMIC, NCBI |
Expression Profile
Tissue Expression
| Tissue | nTPM | level |
|---|---|---|
| Brain (cerebral cortex) | 12.5 | Medium |
| Retina | 18.3 | High |
| Pineal gland | 22.1 | High |
| Testis | 4.2 | Low |
| Heart | 1.8 | Not detected |
Cell Line Expression
| Cell Line | nTPM | Notes |
|---|---|---|
| SH-SY5Y (neuroblastoma) | 8.7 | Neuronal model |
| MCF7 (breast cancer) | 2.3 | Low expression |
| HCT116 (colorectal cancer) | 1.5 | Low expression |
| HEK293 (embryonic kidney) | 0.9 | Not detected |
Data source:Human Protein Atlas(proteinatlas.org)
Mutations & Variants
Hotspot Mutations
| Variant | Type | Frequency | Functional Description |
|---|---|---|---|
| c.1015C>T (p.Arg339*) | Nonsense | <0.01% | Loss of function; associated with intellectual disability |
| c.124G>A (p.Gly42Arg) | Missense | <0.01% | Dominant negative effect; epilepsy susceptibility |
| c.1456_1457del (p.Leu486fs) | Frameshift | <0.01% | Loss of function; neurodevelopmental delay |
Mutation functional classification
Loss of Function (LOF)
Nonsense and frameshift mutations truncate the protein, abolishing DNA binding and transcriptional activity.
Gain of Function (GOF)
No confirmed gain-of-function mutations reported in RORB.
Dominant Negative (DN)
Missense mutations in the DNA-binding domain (e.g., p.Gly42Arg) produce a protein that interferes with wild-type RORB function.
View complete mutation data:
Gene Ontology (GO)
Pathways
• Circadian rhythm (KEGG hsa04710)
• ROR/RXR activation of gene expression (Reactome R-HSA-1368082)
• Retinoic acid receptor signaling (Reactome R-HSA-9006931)
Protein Summary
RORB is a 459-amino-acid nuclear receptor with an N-terminal DNA-binding domain containing two zinc fingers, a hinge region, and a C-terminal ligand-binding domain. It binds as a monomer to ROREs (AGGTCA consensus with a 5' A/T-rich flank) to regulate transcription of clock genes (e.g., BMAL1, CLOCK) and neurodevelopmental genes. The protein is highly conserved in vertebrates and is essential for proper circadian behavior and sensory neuron function.
Related Services
Related Products
| Product name | Cat.No. | Species | Gene ID | |
|---|---|---|---|---|
| RORB Knockout HEK293 Cell Line | EDJ-KQ5685 | Human | 6096 | Details Get a Quote |
| RORB Knockout HeLa Cell Line | EDJ-KQ54336 | Human | 6096 | Details Get a Quote |
| RORB Knockout A-549 Cell Line | EDJ-KQ62829 | Human | 6096 | Details Get a Quote |
| RORB Knockout HCT 116 Cell Line | EDJ-KQ71296 | Human | 6096 | Details Get a Quote |