RBPMS: RNA-Binding Protein with Multiple Splicing
A key regulator of RNA processing, smooth muscle cell phenotype, and cancer progression
Gene Information Card
| Symbol | RBPMS |
|---|---|
| Full Name | RNA Binding Protein, mRNA Processing Factor |
| Gene Type | Protein coding |
| Chromosomal Location | 8p12 |
| NCBI Gene ID | 11030 ncbi.nlm.nih.gov/gene/11030 |
| Ensembl ID | ENSG00000104419 |
| UniProt ID | Q93062 |
| OMIM ID | 601202 |
| HGNC ID | 19097 |
| Aliases | HERMES, RBP-MS, FLJ20297 |
Description
RBPMS (RNA Binding Protein, mRNA Processing Factor) encodes a member of the RNA recognition motif (RRM) family of RNA-binding proteins. It is involved in post-transcriptional regulation, including alternative splicing, mRNA stability, and translation. RBPMS is highly expressed in smooth muscle tissues and plays a critical role in maintaining the contractile phenotype of smooth muscle cells. It also functions as a cofactor for the transcription factor SRF (serum response factor) and is implicated in cancer, particularly in colorectal and breast cancer, where it may act as a tumor suppressor or oncogene depending on context.
Disease Associations
| Disease category | Pathophysiological mechanism | Genomic evidence |
|---|---|---|
| Colorectal Cancer | RBPMS downregulation correlates with poor prognosis; may regulate splicing of cancer-related genes | PMID: 25605248 |
| Breast Cancer | RBPMS expression is reduced in invasive tumors; loss associated with metastasis | PMID: 23555266 |
| Smooth Muscle Dysfunction | RBPMS knockout in mice leads to impaired smooth muscle contractility | PMID: 20086094 |
| Prostate Cancer | RBPMS expression is altered in prostate cancer cell lines | PMID: 29187737 |
Expression Profile
Tissue Expression
| Tissue | nTPM | level |
|---|---|---|
| Smooth muscle (aorta) | 45.2 | High |
| Colon | 28.1 | Medium |
| Breast | 12.5 | Medium |
| Prostate | 8.3 | Low |
| Lung | 6.7 | Low |
| Brain | 2.1 | Not detected |
Cell Line Expression
| Cell Line | nTPM | Notes |
|---|---|---|
| A7r5 (rat aortic smooth muscle) | - | High expression; model for smooth muscle phenotype |
| HCT116 (colorectal carcinoma) | - | Moderate expression; downregulated in invasive lines |
| MCF7 (breast cancer) | - | Low expression compared to normal breast |
| PC3 (prostate cancer) | - | Variable expression |
Data source:Human Protein Atlas(proteinatlas.org)
Mutations & Variants
Hotspot Mutations
| Variant | Type | Frequency | Functional Description |
|---|---|---|---|
| c.487C>T (p.Arg163Trp) | Missense | <0.1% | Unknown; rare variant in population databases |
| c.1012G>A (p.Gly338Ser) | Missense | <0.1% | Unknown; predicted benign |
| c.124_125insA | Frameshift | <0.1% | Loss of function; truncation |
Mutation functional classification
Loss of Function (LOF)
Frameshift and nonsense mutations are predicted to cause loss of RNA-binding activity and downstream splicing regulation.
Gain of Function (GOF)
No gain-of-function mutations have been reported in RBPMS.
Dominant Negative (DN)
No dominant-negative mutations have been characterized.
View complete mutation data:
Gene Ontology (GO)
Pathways
• SRF-dependent gene expression (Reactome: R-HSA-525793)
• mRNA Splicing - Major Pathway (Reactome: R-HSA-72163)
• Processing of Capped Intron-Containing Pre-mRNA (Reactome: R-HSA-72203)
Protein Summary
The RBPMS protein (UniProt Q93062) contains a single N-terminal RNA recognition motif (RRM) that mediates binding to RNA targets, particularly in the 3' UTR of mRNAs. It shuttles between the nucleus and cytoplasm and interacts with SRF to regulate smooth muscle-specific gene expression. RBPMS also modulates alternative splicing of transcripts involved in cell proliferation and migration. Its expression is frequently lost in aggressive cancers, suggesting a tumor-suppressive role.
Related Services
Related Products
| Product name | Cat.No. | Species | Gene ID | |
|---|---|---|---|---|
| RBPMS Knockout HEK293 Cell Line | EDJ-KQ2695 | Human | 11030 | Details Get a Quote |
| RBPMS2 Knockout HEK293 Cell Line | EDJ-KQ15017 | Human | 348093 | Details Get a Quote |
| RBPMS Knockout A-549 Cell Line | EDJ-KQ22148 | Human | 11030 | Details Get a Quote |
| RBPMS2 Knockout A-549 Cell Line | EDJ-KQ44287 | Human | 348093 | Details Get a Quote |
| RBPMS Knockout HCT 116 Cell Line | EDJ-KQ23524 | Human | 11030 | Details Get a Quote |
| RBPMS Knockout HeLa Cell Line | EDJ-KQ23525 | Human | 11030 | Details Get a Quote |
| RBPMS2 Knockout HCT 116 Cell Line | EDJ-KQ45547 | Human | 348093 | Details Get a Quote |
| RBPMS2 Knockout HeLa Cell Line | EDJ-KQ45548 | Human | 348093 | Details Get a Quote |