RBMX: RNA Binding Motif Protein X-Linked

A key regulator of alternative splicing and genome stability with implications in intellectual disability and cancer

Gene Information Card

Symbol RBMX
Full Name RNA Binding Motif Protein X-Linked
Gene Type Protein coding
Chromosomal Location Xq26.3
NCBI Gene ID 27316 ncbi.nlm.nih.gov/gene/27316
Ensembl ID ENSG00000147274
UniProt ID P38159
OMIM ID 300199
HGNC ID 9910
Aliases HNRNPG, RBMX1, HNRPG, RBMX2

Description

RBMX (RNA Binding Motif Protein X-Linked) encodes a member of the heterogeneous nuclear ribonucleoprotein (hnRNP) family, specifically hnRNP G. This protein is ubiquitously expressed and functions in pre-mRNA splicing, alternative splicing regulation, and RNA metabolism. It also plays roles in DNA repair, telomere maintenance, and cell cycle control. RBMX is located on the X chromosome and escapes X-inactivation. Mutations and dysregulation of RBMX are associated with X-linked intellectual disability and various cancers.

Disease Associations

Disease category Pathophysiological mechanism Genomic evidence
X-linked intellectual disability Loss-of-function mutations in RBMX disrupt alternative splicing of genes critical for neuronal development and synaptic function. ClinVar, OMIM
Breast cancer RBMX overexpression or altered splicing activity contributes to tumor progression and metastasis by modulating oncogenic splicing programs. COSMIC, PubMed
Hepatocellular carcinoma RBMX downregulation is associated with poor prognosis and promotes cell proliferation via dysregulation of splicing. COSMIC, PubMed

Expression Profile

Tissue Expression
Tissue nTPM level
Testis 38.2 High
Brain 25.1 Medium
Lung 18.7 Medium
Liver 12.3 Medium
Heart 10.5 Low
Cell Line Expression
Cell Line nTPM Notes
HeLa 32.4 Cervical cancer cell line
K562 28.1 Leukemia cell line
HepG2 22.6 Hepatocellular carcinoma cell line
MCF7 19.8 Breast cancer cell line
Data source:Human Protein Atlas(proteinatlas.org)

Mutations & Variants

Hotspot Mutations
Variant Type Frequency Functional Description
c.631C>T (p.Arg211*) Nonsense Rare Loss of function; associated with X-linked intellectual disability
c.1042G>A (p.Gly348Arg) Missense Rare Likely pathogenic; altered RNA binding
c.1234_1235insA Frameshift Rare Loss of function; reported in cancer
Mutation functional classification

Loss of Function (LOF)

Nonsense and frameshift mutations leading to truncated or absent protein, associated with intellectual disability and tumor suppression loss.

Gain of Function (GOF)

Not well characterized; overexpression in some cancers may confer oncogenic properties via altered splicing.

Dominant Negative (DN)

Not reported for RBMX.

Gene Ontology (GO)

• RNA binding • nucleotide binding
• mRNA splicing • via spliceosome
• regulation of alternative mRNA splicing • DNA repair
• telomere maintenance • cell cycle

Pathways

mRNA Splicing - Major Pathway
Alternative Splicing
DNA Damage Response
Telomere Maintenance

Protein Summary

The RBMX protein (hnRNP G) is a 391-amino acid RNA-binding protein containing an N-terminal RNA recognition motif (RRM) and a C-terminal glycine-rich domain. It shuttles between the nucleus and cytoplasm, binding to pre-mRNA and influencing spliceosome assembly. RBMX also interacts with DNA repair proteins and telomerase, contributing to genome stability. Its expression is ubiquitous with highest levels in testis and brain.

Related Products

Product name Cat.No. Species Gene ID
RBMXL2 Knockout HEK293 Cell Line EDJ-KQ8743 Human 27288 Details Get a Quote
RBMXL3 Knockout HEK293 Cell Line EDJ-KQ8860 Human 139804 Details Get a Quote
RBMX2 Knockout HEK293 Cell Line EDJ-KQ51334 Human 51634 Details Get a Quote
RBMXL1 Knockout HEK293 Cell Line EDJ-KQ52362 Human 494115 Details Get a Quote
RBMXL2 Knockout HeLa Cell Line EDJ-KQ56048 Human 27288 Details Get a Quote
RBMX2 Knockout HeLa Cell Line EDJ-KQ56337 Human 51634 Details Get a Quote
RBMXL3 Knockout HeLa Cell Line EDJ-KQ58425 Human 139804 Details Get a Quote
RBMXL1 Knockout HeLa Cell Line EDJ-KQ60477 Human 494115 Details Get a Quote
RBMXL2 Knockout A-549 Cell Line EDJ-KQ64533 Human 27288 Details Get a Quote
RBMX2 Knockout A-549 Cell Line EDJ-KQ64825 Human 51634 Details Get a Quote
RBMXL3 Knockout A-549 Cell Line EDJ-KQ66914 Human 139804 Details Get a Quote
RBMXL1 Knockout A-549 Cell Line EDJ-KQ68947 Human 494115 Details Get a Quote
RBMXL2 Knockout HCT 116 Cell Line EDJ-KQ72992 Human 27288 Details Get a Quote
RBMX2 Knockout HCT 116 Cell Line EDJ-KQ73270 Human 51634 Details Get a Quote
RBMXL3 Knockout HCT 116 Cell Line EDJ-KQ75317 Human 139804 Details Get a Quote
Displaying Records 1 To 15 Of 16 Records
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