RBMS3 Gene - RNA Binding Motif Single Stranded Interacting Protein 3
A comprehensive resource on RBMS3, including gene function, expression, mutations, and associated diseases.
Gene Information Card
| Symbol | RBMS3 |
|---|---|
| Full Name | RNA Binding Motif Single Stranded Interacting Protein 3 |
| Gene Type | Protein coding |
| Chromosomal Location | 3p24.1 |
| NCBI Gene ID | 27303 ncbi.nlm.nih.gov/gene/27303 |
| Ensembl ID | ENSG00000144647 |
| UniProt ID | Q6XE24 |
| OMIM ID | 605602 |
| HGNC ID | 9929 |
| Aliases | DKFZp686O24118, MGC117188, MGC138290, MGC138291, RNA binding motif, single stranded interacting protein 3 |
Description
RBMS3 (RNA Binding Motif Single Stranded Interacting Protein 3) is a protein-coding gene located on chromosome 3p24.1. It encodes a member of the RNA-binding motif (RRM) family of proteins that bind single-stranded RNA and DNA. RBMS3 is involved in post-transcriptional regulation, including mRNA splicing, stability, and translation. It has been implicated in various cancers, where it may act as a tumor suppressor or oncogene depending on context. The gene is also associated with developmental processes and cellular differentiation.
Disease Associations
| Disease category | Pathophysiological mechanism | Genomic evidence |
|---|---|---|
| Esophageal squamous cell carcinoma | Downregulation of RBMS3 promotes tumor invasion and metastasis via epithelial-mesenchymal transition (EMT). | PMID: 25605247 |
| Breast cancer | RBMS3 suppresses breast cancer cell proliferation and invasion through regulation of Wnt/β-catenin signaling. | PMID: 29367600 |
| Hepatocellular carcinoma | Loss of RBMS3 expression correlates with poor prognosis and promotes metastasis. | PMID: 27565925 |
| Ovarian cancer | RBMS3 inhibits cell migration and invasion by modulating the PI3K/Akt pathway. | PMID: 30131735 |
Expression Profile
Tissue Expression
| Tissue | nTPM | level |
|---|---|---|
| Esophagus | 12.5 | Medium |
| Breast | 8.3 | Low |
| Liver | 6.1 | Low |
| Ovary | 9.7 | Low |
| Testis | 15.2 | Medium |
| Brain | 4.5 | Not detected |
Cell Line Expression
| Cell Line | nTPM | Notes |
|---|---|---|
| HeLa | 10.2 | Cervical cancer cell line |
| MCF7 | 7.8 | Breast cancer cell line |
| HepG2 | 5.4 | Hepatocellular carcinoma cell line |
| A549 | 6.9 | Lung cancer cell line |
| K562 | 3.1 | Leukemia cell line |
Data source:Human Protein Atlas(proteinatlas.org)
Mutations & Variants
Hotspot Mutations
| Variant | Type | Frequency | Functional Description |
|---|---|---|---|
| c.124C>T (p.Arg42*) | Nonsense | <0.1% | Loss of function; truncation of protein |
| c.457G>A (p.Gly153Arg) | Missense | 0.2% | Unknown; predicted damaging by SIFT |
| c.789_790insA (p.Glu264Argfs*12) | Frameshift insertion | <0.1% | Loss of function; premature stop codon |
| c.1024A>G (p.Thr342Ala) | Missense | 0.5% | Unknown; likely benign |
Mutation functional classification
Loss of Function (LOF)
Nonsense and frameshift mutations (e.g., p.Arg42*, p.Glu264Argfs*12) lead to truncated or absent protein, consistent with tumor suppressor activity in some cancers.
Gain of Function (GOF)
No well-characterized gain-of-function mutations reported in RBMS3.
Dominant Negative (DN)
No evidence of dominant-negative mutations in RBMS3.
View complete mutation data:
Gene Ontology (GO)
Pathways
• Wnt signaling pathway (Reactome: R-HSA-195721)
• PI3K/Akt signaling pathway (Reactome: R-HSA-1257604)
• Epithelial-mesenchymal transition (Reactome: R-HSA-1266738)
Protein Summary
The RBMS3 protein contains two RNA recognition motifs (RRMs) that mediate binding to single-stranded RNA and DNA. It is predominantly nuclear and participates in post-transcriptional gene regulation, including alternative splicing and mRNA stability. RBMS3 has been shown to interact with other RNA-binding proteins and transcription factors. Its expression is frequently downregulated in various cancers, suggesting a tumor-suppressive role. The protein is also involved in normal development, particularly in the nervous system and reproductive tissues.
Related Services
Related Products
| Product name | Cat.No. | Species | Gene ID | |
|---|---|---|---|---|
| RBMS3 Knockout HEK293 Cell Line | EDJ-KQ8756 | Human | 27303 | Details Get a Quote |
| RBMS3 Knockout A-549 Cell Line | EDJ-KQ35008 | Human | 27303 | Details Get a Quote |
| RBMS3 Knockout HeLa Cell Line | EDJ-KQ35009 | Human | 27303 | Details Get a Quote |
| RBMS3 Knockout HCT 116 Cell Line | EDJ-KQ72997 | Human | 27303 | Details Get a Quote |