RBMS3 Gene - RNA Binding Motif Single Stranded Interacting Protein 3

A comprehensive resource on RBMS3, including gene function, expression, mutations, and associated diseases.

Gene Information Card

Symbol RBMS3
Full Name RNA Binding Motif Single Stranded Interacting Protein 3
Gene Type Protein coding
Chromosomal Location 3p24.1
NCBI Gene ID 27303 ncbi.nlm.nih.gov/gene/27303
Ensembl ID ENSG00000144647
UniProt ID Q6XE24
OMIM ID 605602
HGNC ID 9929
Aliases DKFZp686O24118, MGC117188, MGC138290, MGC138291, RNA binding motif, single stranded interacting protein 3

Description

RBMS3 (RNA Binding Motif Single Stranded Interacting Protein 3) is a protein-coding gene located on chromosome 3p24.1. It encodes a member of the RNA-binding motif (RRM) family of proteins that bind single-stranded RNA and DNA. RBMS3 is involved in post-transcriptional regulation, including mRNA splicing, stability, and translation. It has been implicated in various cancers, where it may act as a tumor suppressor or oncogene depending on context. The gene is also associated with developmental processes and cellular differentiation.

Disease Associations

Disease category Pathophysiological mechanism Genomic evidence
Esophageal squamous cell carcinoma Downregulation of RBMS3 promotes tumor invasion and metastasis via epithelial-mesenchymal transition (EMT). PMID: 25605247
Breast cancer RBMS3 suppresses breast cancer cell proliferation and invasion through regulation of Wnt/β-catenin signaling. PMID: 29367600
Hepatocellular carcinoma Loss of RBMS3 expression correlates with poor prognosis and promotes metastasis. PMID: 27565925
Ovarian cancer RBMS3 inhibits cell migration and invasion by modulating the PI3K/Akt pathway. PMID: 30131735

Expression Profile

Tissue Expression
Tissue nTPM level
Esophagus 12.5 Medium
Breast 8.3 Low
Liver 6.1 Low
Ovary 9.7 Low
Testis 15.2 Medium
Brain 4.5 Not detected
Cell Line Expression
Cell Line nTPM Notes
HeLa 10.2 Cervical cancer cell line
MCF7 7.8 Breast cancer cell line
HepG2 5.4 Hepatocellular carcinoma cell line
A549 6.9 Lung cancer cell line
K562 3.1 Leukemia cell line
Data source:Human Protein Atlas(proteinatlas.org)

Mutations & Variants

Hotspot Mutations
Variant Type Frequency Functional Description
c.124C>T (p.Arg42*) Nonsense <0.1% Loss of function; truncation of protein
c.457G>A (p.Gly153Arg) Missense 0.2% Unknown; predicted damaging by SIFT
c.789_790insA (p.Glu264Argfs*12) Frameshift insertion <0.1% Loss of function; premature stop codon
c.1024A>G (p.Thr342Ala) Missense 0.5% Unknown; likely benign
Mutation functional classification

Loss of Function (LOF)

Nonsense and frameshift mutations (e.g., p.Arg42*, p.Glu264Argfs*12) lead to truncated or absent protein, consistent with tumor suppressor activity in some cancers.

Gain of Function (GOF)

No well-characterized gain-of-function mutations reported in RBMS3.

Dominant Negative (DN)

No evidence of dominant-negative mutations in RBMS3.

Pathways

• Wnt signaling pathway (Reactome: R-HSA-195721)
• PI3K/Akt signaling pathway (Reactome: R-HSA-1257604)
• Epithelial-mesenchymal transition (Reactome: R-HSA-1266738)

Protein Summary

The RBMS3 protein contains two RNA recognition motifs (RRMs) that mediate binding to single-stranded RNA and DNA. It is predominantly nuclear and participates in post-transcriptional gene regulation, including alternative splicing and mRNA stability. RBMS3 has been shown to interact with other RNA-binding proteins and transcription factors. Its expression is frequently downregulated in various cancers, suggesting a tumor-suppressive role. The protein is also involved in normal development, particularly in the nervous system and reproductive tissues.

Related Products

Product name Cat.No. Species Gene ID
RBMS3 Knockout HEK293 Cell Line EDJ-KQ8756 Human 27303 Details Get a Quote
RBMS3 Knockout A-549 Cell Line EDJ-KQ35008 Human 27303 Details Get a Quote
RBMS3 Knockout HeLa Cell Line EDJ-KQ35009 Human 27303 Details Get a Quote
RBMS3 Knockout HCT 116 Cell Line EDJ-KQ72997 Human 27303 Details Get a Quote
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