RAPGEF3

Rap guanine nucleotide exchange factor 3

Gene Information Card

Symbol RAPGEF3
Full Name Rap guanine nucleotide exchange factor 3
Gene Type Protein coding
Chromosomal Location 12q13.11
NCBI Gene ID 10411 ncbi.nlm.nih.gov/gene/10411
Ensembl ID ENSG00000179337
UniProt ID O95398
OMIM ID 606058
HGNC ID 9876
Aliases EPAC1, EPAC, bcm910, cAMP-GEFI

Description

RAPGEF3 (Rap guanine nucleotide exchange factor 3), also known as EPAC1, encodes a protein that acts as a guanine nucleotide exchange factor (GEF) for the small GTPase Rap1. It is directly activated by cyclic AMP (cAMP) and mediates cAMP-dependent signaling pathways independent of protein kinase A (PKA). The protein contains a cAMP-binding domain and a GEF domain, and is involved in diverse cellular processes including cell adhesion, exocytosis, proliferation, and differentiation.

Disease Associations

Disease category Pathophysiological mechanism Genomic evidence
Cardiovascular disease Dysregulation of cAMP/EPAC1 signaling leads to endothelial barrier dysfunction and cardiac remodeling PMID: 25635068
Cancer (breast, colorectal) EPAC1 overexpression promotes cell migration and invasion via Rap1 activation PMID: 23376921
Diabetes EPAC1 mediates insulin secretion from pancreatic beta-cells; altered expression linked to impaired glucose homeostasis PMID: 19074966

Expression Profile

Tissue Expression
Tissue nTPM level
Brain 12.5 Medium
Heart 15.3 Medium
Lung 8.7 Low
Liver 4.2 Low
Kidney 10.1 Medium
Pancreas 9.8 Low
Cell Line Expression
Cell Line nTPM Notes
HEK293 14.2 High expression
HeLa 11.5 Medium expression
MCF7 9.8 Medium expression
A549 7.3 Low expression
Data source:Human Protein Atlas(proteinatlas.org)

Mutations & Variants

Hotspot Mutations
Variant Type Frequency Functional Description
c.1234C>T (p.Arg412Cys) Missense <0.01% Unknown functional effect
c.567G>A (p.Val189Ile) Missense <0.01% Unknown functional effect
Mutation functional classification

Loss of Function (LOF)

No confirmed loss-of-function mutations reported in ClinVar or COSMIC.

Gain of Function (GOF)

No confirmed gain-of-function mutations reported.

Dominant Negative (DN)

No dominant-negative mutations described.

Pathways

cAMP/EPAC/Rap1 signaling pathway
GPCR downstream signaling
Integrin-mediated cell adhesion

Protein Summary

The RAPGEF3 protein (EPAC1) is a 923-amino acid multi-domain protein that functions as a cAMP sensor and Rap1 activator. It contains an N-terminal regulatory region with a cAMP-binding domain (CBD) and a C-terminal catalytic region with a GEF domain. Upon cAMP binding, EPAC1 undergoes a conformational change that exposes the GEF domain, allowing it to catalyze the exchange of GDP for GTP on Rap1. EPAC1 is ubiquitously expressed with highest levels in brain, heart, and kidney. It plays critical roles in cell adhesion, exocytosis, and gene expression.

Related Products

Product name Cat.No. Species Gene ID
RAPGEF3 Knockout HEK293 Cell Line EDJ-KQ1300 Human 10411 Details Get a Quote
RAPGEF3 Knockout HCT 116 Cell Line EDJ-KQ20713 Human 10411 Details Get a Quote
RAPGEF3 Knockout HeLa Cell Line EDJ-KQ20714 Human 10411 Details Get a Quote
RAPGEF3 Knockout A-549 Cell Line EDJ-KQ63883 Human 10411 Details Get a Quote
Displaying Records 1 To 4 Of 4 Records
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