RAP1B
Member of the RAS oncogene family; involved in cell adhesion, migration, and signaling
Gene Information Card
| Symbol | RAP1B |
|---|---|
| Full Name | RAP1B, member of RAS oncogene family |
| Gene Type | protein-coding |
| Chromosomal Location | 12q15 |
| NCBI Gene ID | 5908 ncbi.nlm.nih.gov/gene/5908 |
| Ensembl ID | ENSG00000127314 |
| UniProt ID | P61224 |
| OMIM ID | 179530 |
| HGNC ID | 9857 |
| Aliases | RAP1B, K-REV, RAL1B, smg p21B |
Description
RAP1B is a small GTPase belonging to the RAS superfamily. It cycles between an active GTP-bound and inactive GDP-bound state, regulating diverse cellular processes including cell adhesion, migration, proliferation, and differentiation. RAP1B is widely expressed and plays critical roles in integrin-mediated adhesion, cadherin-based cell-cell junctions, and signal transduction pathways. Dysregulation of RAP1B has been implicated in cancer, cardiovascular diseases, and immune disorders.
Disease Associations
| Disease category | Pathophysiological mechanism | Genomic evidence |
|---|---|---|
| Cancer (various types) | Altered RAP1B expression and mutations affect cell adhesion, migration, and proliferation | COSMIC, ClinVar |
| Cardiovascular disease | RAP1B regulates endothelial barrier function and platelet aggregation | UniProt, NCBI |
| Immune disorders | RAP1B modulates T-cell and B-cell adhesion and migration | UniProt, NCBI |
Expression Profile
Tissue Expression
| Tissue | nTPM | level |
|---|---|---|
| Lung | 28.5 | High |
| Spleen | 22.3 | High |
| Brain | 18.7 | Medium |
| Heart | 15.2 | Medium |
| Liver | 12.1 | Medium |
| Kidney | 10.8 | Low |
Cell Line Expression
| Cell Line | nTPM | Notes |
|---|---|---|
| HEK 293 | 35.2 | High expression |
| HeLa | 29.8 | High expression |
| A549 | 24.5 | Medium expression |
| MCF7 | 20.1 | Medium expression |
| K562 | 18.3 | Medium expression |
Data source:Human Protein Atlas(proteinatlas.org)
Mutations & Variants
Hotspot Mutations
| Variant | Type | Frequency | Functional Description |
|---|---|---|---|
| c.205G>A (p.Gly69Arg) | Missense | 0.02% | Gain-of-function; increased GTP binding |
| c.374A>G (p.Asn125Ser) | Missense | 0.01% | Unknown functional effect |
| c.488C>T (p.Pro163Leu) | Missense | 0.01% | Loss-of-function; reduced GTPase activity |
Mutation functional classification
Loss of Function (LOF)
Mutations reducing GTPase activity or impairing effector binding (e.g., p.Pro163Leu)
Gain of Function (GOF)
Mutations increasing GTP-bound state or enhancing downstream signaling (e.g., p.Gly69Arg)
Dominant Negative (DN)
Not well characterized for RAP1B; some mutations may interfere with wild-type function
View complete mutation data:
Gene Ontology (GO)
| • GTPase activity | • GTP binding |
| • GDP binding | • protein binding |
| • signal transduction | • cell adhesion |
| • cell migration | • regulation of cell proliferation |
| • integrin-mediated signaling pathway | • Ras protein signal transduction |
Pathways
• Rap1 signaling pathway
• Integrin signaling pathway
• Cell adhesion molecules (CAMs)
• Chemokine signaling pathway
• Regulation of actin cytoskeleton
• MAPK signaling pathway
Protein Summary
RAP1B is a 184-amino acid small GTPase (molecular weight ~21 kDa) that localizes to the plasma membrane and endomembranes. It shares high sequence similarity with RAP1A and other RAS family members. RAP1B is activated by guanine nucleotide exchange factors (GEFs) and inactivated by GTPase-activating proteins (GAPs). It regulates cell adhesion by promoting integrin activation and cadherin stabilization. RAP1B also modulates cell migration, proliferation, and differentiation through downstream effectors such as B-Raf, PI3K, and RalGDS. Post-translational modifications include prenylation and palmitoylation, which are essential for membrane targeting.
Related Services
Related Products
| Product name | Cat.No. | Species | Gene ID | |
|---|---|---|---|---|
| RAP1B Knockout HEK293 Cell Line | EDJ-KQ50562 | Human | 5908 | Details Get a Quote |
| RAP1B Knockout HeLa Cell Line | EDJ-KQ54293 | Human | 5908 | Details Get a Quote |
| RAP1B Knockout A-549 Cell Line | EDJ-KQ62789 | Human | 5908 | Details Get a Quote |
| RAP1B Knockout HCT 116 Cell Line | EDJ-KQ71253 | Human | 5908 | Details Get a Quote |