PTDSS1 Gene: Phosphatidylserine Synthase 1
Genetic and Functional Insights into PTDSS1, a Key Enzyme in Phospholipid Biosynthesis
Gene Information Card
| Symbol | PTDSS1 |
|---|---|
| Full Name | phosphatidylserine synthase 1 |
| Gene Type | protein-coding |
| Chromosomal Location | 8q22.1 |
| NCBI Gene ID | 9791 ncbi.nlm.nih.gov/gene/9791 |
| Ensembl ID | ENSG00000156471 |
| UniProt ID | P48651 |
| OMIM ID | 612792 |
| HGNC ID | 9587 |
| Aliases | PSSA, PTDSS1, PSS1 |
Description
The PTDSS1 gene encodes phosphatidylserine synthase 1, an enzyme that catalyzes the base-exchange reaction converting phosphatidylcholine to phosphatidylserine. This enzyme is critical for the biosynthesis of phosphatidylserine, a phospholipid essential for cell membrane integrity and signaling. PTDSS1 is ubiquitously expressed and plays a role in apoptosis, cell signaling, and membrane dynamics. Mutations in PTDSS1 are associated with Lenz-Majewski syndrome, a rare genetic disorder characterized by skeletal abnormalities and intellectual disability.
Disease Associations
| Disease category | Pathophysiological mechanism | Genomic evidence |
|---|---|---|
| Lenz-Majewski syndrome | Gain-of-function mutations in PTDSS1 lead to increased phosphatidylserine synthesis, disrupting bone development and connective tissue homeostasis. | ClinVar and OMIM report multiple missense mutations (e.g., p.Arg97Trp, p.Arg97Gln) in patients with Lenz-Majewski syndrome. |
Expression Profile
Tissue Expression
| Tissue | nTPM | level |
|---|---|---|
| Brain | 12.3 | Medium |
| Liver | 8.7 | Medium |
| Kidney | 7.9 | Medium |
| Testis | 6.5 | Low |
| Lung | 5.2 | Low |
Cell Line Expression
| Cell Line | nTPM | Notes |
|---|---|---|
| HeLa | 15.4 | High expression in cervical cancer cell line |
| A549 | 10.2 | Moderate expression in lung carcinoma |
| HepG2 | 9.8 | Moderate expression in hepatocellular carcinoma |
| MCF7 | 7.3 | Low expression in breast cancer |
Data source:Human Protein Atlas(proteinatlas.org)
Mutations & Variants
Hotspot Mutations
| Variant | Type | Frequency | Functional Description |
|---|---|---|---|
| p.Arg97Trp | Missense | Reported in Lenz-Majewski syndrome | Gain-of-function, increased enzyme activity |
| p.Arg97Gln | Missense | Reported in Lenz-Majewski syndrome | Gain-of-function, increased enzyme activity |
| p.Arg97Pro | Missense | Reported in Lenz-Majewski syndrome | Gain-of-function, increased enzyme activity |
Mutation functional classification
Loss of Function (LOF)
No loss-of-function mutations have been reported in PTDSS1; complete loss may be lethal.
Gain of Function (GOF)
Mutations at Arg97 (e.g., Arg97Trp, Arg97Gln) result in gain-of-function, increasing phosphatidylserine synthase activity, leading to Lenz-Majewski syndrome.
Dominant Negative (DN)
No dominant-negative effects have been documented for PTDSS1 mutations.
View complete mutation data:
Gene Ontology (GO)
| • phosphatidylserine synthase activity | • phospholipid biosynthetic process |
| • membrane | • endoplasmic reticulum |
| • calcium ion binding |
Pathways
• Phospholipid metabolism
• Glycerophospholipid biosynthesis
Protein Summary
PTDSS1 is a 473-amino acid protein localized to the endoplasmic reticulum and mitochondria-associated membranes. It catalyzes the exchange of L-serine with the polar head group of phosphatidylcholine or phosphatidylethanolamine to produce phosphatidylserine. The enzyme requires calcium ions for activity and is involved in the regulation of cellular phosphatidylserine levels, which are crucial for apoptosis and membrane asymmetry. Structural studies indicate that the active site is on the cytoplasmic side of the membrane, and the protein forms homodimers. PTDSS1 is ubiquitously expressed, with higher levels in brain and liver, and its dysregulation is linked to rare genetic disorders.
Related Services
Related Products
| Product name | Cat.No. | Species | Gene ID | |
|---|---|---|---|---|
| PTDSS1 Knockout HEK293 Cell Line | EDJ-KQ2022 | Human | 9791 | Details Get a Quote |
| PTDSS1 Knockout A-549 Cell Line | EDJ-KQ22050 | Human | 9791 | Details Get a Quote |
| PTDSS1 Knockout HCT 116 Cell Line | EDJ-KQ22051 | Human | 9791 | Details Get a Quote |
| PTDSS1 Knockout HeLa Cell Line | EDJ-KQ22052 | Human | 9791 | Details Get a Quote |