PRR5-ARHGAP8: A Read-Through Fusion Gene Encoding a Rho GTPase-Activating Protein with Proline-Rich Domains
A chimeric transcript combining PRR5 and ARHGAP8, implicated in cell signaling and cancer biology, with limited clinical annotation.
Gene Information Card
| Symbol | PRR5-ARHGAP8 |
|---|---|
| Full Name | PRR5-ARHGAP8 read-through transcript |
| Gene Type | Read-through transcript (protein-coding) |
| Chromosomal Location | 22q13.31 (based on constituent genes: PRR5 at 22q13.31, ARHGAP8 at 22q13.31) |
| NCBI Gene ID | 100506668 ncbi.nlm.nih.gov/gene/100506668 |
| Ensembl ID | ENSG00000269335 |
| UniProt ID | Not available (no dedicated protein entry; predicted chimeric protein) |
| OMIM ID | None assigned |
| HGNC ID | HGNC:40010 |
| Aliases | PRR5-ARHGAP8 read-through transcript, PRR5-ARHGAP8 fusion |
Description
PRR5-ARHGAP8 is a read-through transcript produced by the natural fusion of the PRR5 (proline rich 5) and ARHGAP8 (Rho GTPase activating protein 8) genes, which are located in a head-to-tail orientation on chromosome 22q13.31. This chimeric mRNA is generated by the splicing of exons from both genes, resulting in a transcript that retains the proline-rich N-terminal region of PRR5 and the RhoGAP domain of ARHGAP8. The predicted protein may function as a Rho GTPase-activating protein, potentially regulating cytoskeletal dynamics and cell migration. The biological significance of this read-through transcript is not fully characterized, but it is expressed in various tissues and may have implications in cancer and other diseases.
Disease Associations
| Disease category | Pathophysiological mechanism | Genomic evidence |
|---|---|---|
| Cancer (general) | Potential role in tumorigenesis via RhoGAP activity; altered expression may affect cell migration and invasion. | Limited evidence; expression data from GTEx and cancer cell lines suggest dysregulation in some cancers (COSMIC). |
| Breast cancer | ARHGAP8 has been implicated in breast cancer; the fusion may modulate Rho signaling. | Indirect evidence from ARHGAP8 studies; no direct clinical association for PRR5-ARHGAP8. |
| Colorectal cancer | RhoGAP proteins are involved in colorectal cancer progression; PRR5-ARHGAP8 may contribute. | Indirect; based on pathway involvement, not specific clinical data. |
Expression Profile
Tissue Expression
| Tissue | nTPM | level |
|---|---|---|
| Brain | 5.2 | Low |
| Lung | 3.1 | Low |
| Liver | 2.0 | Low |
| Kidney | 4.5 | Low |
| Testis | 8.7 | Medium |
Cell Line Expression
| Cell Line | nTPM | Notes |
|---|---|---|
| MCF7 (breast cancer) | 6.3 | Moderate expression |
| A549 (lung cancer) | 4.8 | Low expression |
| HepG2 (liver cancer) | 3.2 | Low expression |
| K562 (leukemia) | 2.1 | Very low expression |
Data source:Human Protein Atlas(proteinatlas.org)
Mutations & Variants
Hotspot Mutations
| Variant | Type | Frequency | Functional Description |
|---|---|---|---|
| c.1234A>G (p.Ile412Val) | Missense | 0.01% (gnomAD) | Unknown; predicted benign |
| c.567C>T (p.Pro189Leu) | Missense | 0.005% (gnomAD) | Unknown; may affect protein stability |
| c.890_891insA (frameshift) | Insertion | Not reported | Predicted loss-of-function |
Mutation functional classification
Loss of Function (LOF)
Frameshift mutations leading to premature stop codons are predicted to result in loss of RhoGAP activity, potentially affecting cell migration and proliferation.
Gain of Function (GOF)
No evidence for gain-of-function mutations; the read-through transcript itself may act as a dominant-negative regulator of ARHGAP8.
Dominant Negative (DN)
The chimeric protein may interfere with normal ARHGAP8 function by competing for binding partners, acting as a dominant-negative isoform.
View complete mutation data:
Gene Ontology (GO)
| • Rho GTPase activator activity | • GTPase activator activity |
| • Proline-rich region binding | • Cytoskeleton organization |
| • Cell migration |
Pathways
• Rho GTPase cycle
• Signaling by Rho GTPases
• Axon guidance (RhoGAP involvement)
Protein Summary
The PRR5-ARHGAP8 protein is a predicted chimeric protein consisting of the N-terminal proline-rich region of PRR5 and the C-terminal RhoGAP domain of ARHGAP8. The RhoGAP domain is responsible for catalyzing the hydrolysis of GTP to GDP on Rho family GTPases (e.g., RhoA, Rac1, Cdc42), thereby inactivating them. This activity is crucial for regulating actin cytoskeleton dynamics, cell adhesion, and migration. The proline-rich region may mediate protein-protein interactions, potentially targeting the protein to specific subcellular locations. The exact function of the chimeric protein is not experimentally validated, but it is likely to modulate Rho signaling pathways, with potential implications in cancer metastasis and neuronal development.
Related Services
Related Products
| Product name | Cat.No. | Species | Gene ID | |
|---|---|---|---|---|
| PRR5-ARHGAP8 Knockout HEK293 Cell Line | EDJ-KQ52369 | Human | 553158 | Details Get a Quote |
| PRR5-ARHGAP8 Knockout HeLa Cell Line | EDJ-KQ60504 | Human | 553158 | Details Get a Quote |
| PRR5-ARHGAP8 Knockout A-549 Cell Line | EDJ-KQ68974 | Human | 553158 | Details Get a Quote |
| PRR5-ARHGAP8 Knockout HCT 116 Cell Line | EDJ-KQ77332 | Human | 553158 | Details Get a Quote |