PIGBOS1 Gene: Structure, Function, and Clinical Relevance
A comprehensive biomedical overview of PIGBOS1 (PIGB Opposite Strand 1), including genomic context, expression, and disease associations.
Gene Information Card
| Symbol | PIGBOS1 |
|---|---|
| Full Name | PIGB Opposite Strand 1 |
| Gene Type | protein-coding |
| Chromosomal Location | 18q21.2 |
| NCBI Gene ID | 100287102 ncbi.nlm.nih.gov/gene/100287102 |
| Ensembl ID | ENSG00000267508 |
| UniProt ID | A6NM11 |
| OMIM ID | Not available |
| HGNC ID | HGNC:52520 |
| Aliases | C18orf54, PIGBOS |
Description
PIGBOS1 (PIGB Opposite Strand 1) is a protein-coding gene located on chromosome 18q21.2. It is transcribed from the opposite strand of the PIGB gene, hence its name. The gene encodes a small protein of 106 amino acids that is localized to the mitochondrial outer membrane. PIGBOS1 has been implicated in the regulation of the unfolded protein response (UPR) by interacting with the mitochondrial protein CLCC1, thereby modulating cellular stress responses. Its expression is relatively ubiquitous across tissues, with notable levels in the thyroid and adrenal glands. While no direct disease-causing mutations have been extensively characterized, its role in UPR suggests potential involvement in cancer and metabolic disorders.
Disease Associations
| Disease category | Pathophysiological mechanism | Genomic evidence |
|---|---|---|
| Cancer (general) | PIGBOS1 modulates the unfolded protein response (UPR) via interaction with CLCC1, potentially influencing tumor cell survival under stress. | Experimental evidence from cell line studies (e.g., HeLa) showing UPR modulation; no direct clinical cohort data yet. |
| Metabolic disorders | Altered UPR regulation may contribute to metabolic stress in tissues like liver and adipose, but specific disease associations are not established. | Inferred from expression data and UPR pathway involvement; no direct clinical evidence. |
Expression Profile
Tissue Expression
| Tissue | nTPM | level |
|---|---|---|
| Thyroid | 12.3 | High |
| Adrenal gland | 10.8 | High |
| Liver | 8.5 | Medium |
| Kidney | 7.9 | Medium |
| Brain | 5.2 | Low |
Cell Line Expression
| Cell Line | nTPM | Notes |
|---|---|---|
| HeLa | 15.2 | High expression; used in functional studies of UPR. |
| HEK293 | 12.7 | Moderate expression; common for overexpression experiments. |
| HepG2 | 9.8 | Liver-derived; relevant for metabolic studies. |
| MCF7 | 7.5 | Breast cancer line; expression correlates with stress response. |
Data source:Human Protein Atlas(proteinatlas.org)
Mutations & Variants
Hotspot Mutations
| Variant | Type | Frequency | Functional Description |
|---|---|---|---|
| c.123A>G (p.Ile41Met) | Missense | Not reported in population databases | Predicted benign; no functional impact known. |
| c.45C>T (p.Ser15=) | Synonymous | Minor allele frequency <0.01% | No effect on protein sequence. |
Mutation functional classification
Loss of Function (LOF)
No loss-of-function mutations have been characterized. Knockdown studies in cell lines show reduced UPR modulation, but no clinical phenotype is associated.
Gain of Function (GOF)
No gain-of-function mutations reported. Overexpression of wild-type PIGBOS1 enhances UPR suppression, but no activating mutations are known.
Dominant Negative (DN)
No dominant-negative variants identified. The protein's small size and single transmembrane domain may limit such effects.
View complete mutation data:
Gene Ontology (GO)
| • mitochondrial outer membrane | • protein binding |
| • unfolded protein response | • cellular response to stress |
Pathways
• Unfolded Protein Response (UPR) - mitochondrial branch
• Mitochondrial stress signaling
Protein Summary
PIGBOS1 is a 106-amino acid protein with a single transmembrane domain, localized to the mitochondrial outer membrane. It interacts with CLCC1, a chloride channel protein, to negatively regulate the unfolded protein response (UPR) during endoplasmic reticulum stress. This interaction is crucial for maintaining cellular homeostasis under stress conditions. The protein is widely expressed, with highest levels in endocrine tissues. Its role in UPR suggests potential implications in cancer and metabolic diseases, though clinical evidence is still emerging.
Related Services
Related Products
| Product name | Cat.No. | Species | Gene ID | |
|---|---|---|---|---|
| PIGBOS1 Knockout HEK293 Cell Line | EDJ-KQ14760 | Human | 101928527 | Details Get a Quote |
| PIGBOS1 Knockout A-549 Cell Line | EDJ-KQ45145 | Human | 101928527 | Details Get a Quote |
| PIGBOS1 Knockout HCT 116 Cell Line | EDJ-KQ45146 | Human | 101928527 | Details Get a Quote |
| PIGBOS1 Knockout HeLa Cell Line | EDJ-KQ45147 | Human | 101928527 | Details Get a Quote |