OR56A5 Gene: Olfactory Receptor 56A5
Genetic and functional insights into OR56A5, a chemosensory receptor with potential roles in sensory perception and disease.
Gene Information Card
| Symbol | OR56A5 |
|---|---|
| Full Name | Olfactory Receptor Family 56 Subfamily A Member 5 |
| Gene Type | protein-coding |
| Chromosomal Location | 11p15.4 |
| NCBI Gene ID | 120793 ncbi.nlm.nih.gov/gene/120793 |
| Ensembl ID | ENSG00000255374 |
| UniProt ID | Q8NGJ1 |
| OMIM ID | Not available |
| HGNC ID | 15368 |
| Aliases | OR56A5P, OR11-69 |
Description
OR56A5 encodes an olfactory receptor belonging to the G protein-coupled receptor (GPCR) family. Olfactory receptors are primarily expressed in the cilia of olfactory sensory neurons, where they detect odorant molecules and initiate a signaling cascade that leads to the perception of smell. OR56A5 is part of the large olfactory receptor gene family, which is the largest gene family in the human genome. Although its specific odorant ligands are not fully characterized, it is presumed to play a role in chemosensory perception. Recent studies have also suggested potential ectopic expression in non-olfactory tissues, where it may contribute to various physiological and pathological processes.
Disease Associations
| Disease category | Pathophysiological mechanism | Genomic evidence |
|---|---|---|
| Disease | Mechanism | Evidence |
| Not established | No direct disease association has been confirmed for OR56A5. As an olfactory receptor, it is not typically linked to Mendelian disorders. However, altered expression of olfactory receptors has been observed in various cancers, but specific evidence for OR56A5 is lacking. | No curated disease association in OMIM or ClinVar as of the latest update. |
Expression Profile
Tissue Expression
| Tissue | nTPM | level |
|---|---|---|
| Tissue | nTPM | Level |
| Testis | 0.5 | Low |
| Skin | 0.3 | Low |
| Lung | 0.2 | Low |
| Brain | 0.1 | Low |
Cell Line Expression
| Cell Line | nTPM | Notes |
|---|---|---|
| Cell Line | nTPM | Notes |
| HEK293 | 0.1 | Low expression; often used for heterologous expression studies. |
| HeLa | 0.0 | Not expressed. |
| A549 | 0.2 | Low expression; lung carcinoma cell line. |
Data source:Human Protein Atlas(proteinatlas.org)
Mutations & Variants
Hotspot Mutations
| Variant | Type | Frequency | Functional Description |
|---|---|---|---|
| Variant | Type | Frequency | Effect |
| rs201430920 | SNV (missense) | 0.001 (global) | Amino acid substitution; functional impact unknown. |
| rs148613280 | SNV (synonymous) | 0.002 (global) | No amino acid change; likely benign. |
Mutation functional classification
Loss of Function (LOF)
No loss-of-function mutations have been reported for OR56A5 in curated databases. As an olfactory receptor, loss of function might affect odorant detection but would not be clinically significant.
Gain of Function (GOF)
No gain-of-function mutations have been documented. Gain-of-function in olfactory receptors is rare and not reported for OR56A5.
Dominant Negative (DN)
No dominant-negative effects have been described for OR56A5. Olfactory receptors are monomeric GPCRs, and dominant-negative interactions are not typical.
View complete mutation data:
Gene Ontology (GO)
| • G protein-coupled receptor activity | • olfactory receptor activity |
| • plasma membrane | • integral component of membrane |
| • detection of chemical stimulus involved in sensory perception of smell | • G protein-coupled receptor signaling pathway |
Pathways
• Olfactory transduction (KEGG: hsa04740)
• GPCR downstream signaling (Reactome: R-HSA-418594)
Protein Summary
OR56A5 is a 312-amino acid protein with a typical GPCR structure, including seven transmembrane domains. It is localized to the plasma membrane and functions as a receptor for odorant molecules. Upon ligand binding, it activates G proteins, leading to the production of cAMP and subsequent ion channel opening, which generates an action potential in olfactory neurons. The protein is encoded by a single exon gene. Structural studies are limited, but homology models suggest conserved motifs common to olfactory receptors.
Related Services
Related Products
| Product name | Cat.No. | Species | Gene ID | |
|---|---|---|---|---|
| OR56A5 Knockout HEK293 Cell Line | EDJ-KQ14638 | Human | 390084 | Details Get a Quote |
| OR56A5 Knockout HeLa Cell Line | EDJ-KQ60134 | Human | 390084 | Details Get a Quote |
| OR56A5 Knockout A-549 Cell Line | EDJ-KQ68595 | Human | 390084 | Details Get a Quote |
| OR56A5 Knockout HCT 116 Cell Line | EDJ-KQ76964 | Human | 390084 | Details Get a Quote |
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