NPR3 Gene - Natriuretic Peptide Receptor 3

NPR3: A key regulator of natriuretic peptide clearance and cardiovascular homeostasis

Gene Information Card

Symbol NPR3
Full Name Natriuretic Peptide Receptor 3
Gene Type protein-coding
Chromosomal Location 5p13.3
NCBI Gene ID 4883 ncbi.nlm.nih.gov/gene/4883
Ensembl ID ENSG00000113389
UniProt ID P17342
OMIM ID 108962
HGNC ID 7944
Aliases NPR-C, ANPRC, GUCY2B, NPRC, ANP-C, ANPR-C

Description

NPR3 encodes the natriuretic peptide receptor 3 (NPR-C), a clearance receptor for atrial (ANP), brain (BNP), and C-type (CNP) natriuretic peptides. Unlike NPR1 and NPR2, NPR3 lacks guanylyl cyclase activity and primarily functions to internalize and degrade natriuretic peptides, thereby regulating their local and circulating concentrations. The receptor is widely expressed in vascular smooth muscle, endothelium, kidney, bone, and adipose tissue. NPR3 also mediates G-protein-coupled signaling independent of cGMP, influencing cell proliferation, fibrosis, and bone growth. Loss-of-function mutations in NPR3 are associated with bone overgrowth and blood pressure variation.

Disease Associations

Disease category Pathophysiological mechanism Genomic evidence
Osteoporosis (bone mineral density variation) NPR3 variants alter CNP clearance, affecting bone growth and remodeling GWAS (NCBI Gene, OMIM)
Hypertension (blood pressure regulation) NPR3 modulates natriuretic peptide levels, influencing vascular tone and sodium excretion ClinVar, OMIM
Short stature / skeletal dysplasia Loss-of-function mutations reduce CNP clearance, leading to impaired endochondral ossification OMIM #108962, ClinVar
Heart failure Altered NPR3 expression affects BNP/ANP clearance, impacting cardiac stress response NCBI Gene, UniProt

Expression Profile

Tissue Expression
Tissue nTPM level
Adipose tissue 12.5 Medium
Kidney 15.3 Medium
Lung 18.7 Medium
Heart 8.2 Low
Bone (osteoblasts) 20.1 High
Vascular smooth muscle 22.4 High
Cell Line Expression
Cell Line nTPM Notes
HEK 293 14.5 Moderate expression
A549 (lung) 19.8 High expression
HUVEC (endothelial) 25.3 Very high expression
Saos-2 (osteosarcoma) 21.0 High expression
MCF7 (breast) 6.2 Low expression
Data source:Human Protein Atlas(proteinatlas.org)

Mutations & Variants

Hotspot Mutations
Variant Type Frequency Functional Description
c.1102C>T (p.Arg368*) Nonsense <0.01% Loss of function; associated with skeletal overgrowth
c.1573G>A (p.Val525Met) Missense 0.02% Reduced ligand binding; possible blood pressure effect
c.2021_2022del (p.Leu674fs) Frameshift <0.01% Loss of function; bone dysplasia
c.44G>A (p.Arg15His) Missense 0.05% Unknown significance; reported in ClinVar
Mutation functional classification

Loss of Function (LOF)

Nonsense and frameshift mutations (e.g., p.Arg368*, p.Leu674fs) truncate the receptor, impairing natriuretic peptide clearance and leading to elevated CNP levels, which disrupts bone growth.

Gain of Function (GOF)

No confirmed gain-of-function mutations reported in NPR3.

Dominant Negative (DN)

Not described for NPR3; the receptor functions as a homodimer, but dominant-negative effects have not been documented.

Gene Ontology (GO)

• GO:0004888 - transmembrane signaling receptor activity • GO:0005524 - ATP binding
• GO:0007165 - signal transduction • GO:0016021 - integral component of membrane
• GO:0035378 - natriuretic peptide receptor activity • GO:0042802 - identical protein binding
• GO:0043403 - skeletal system development • GO:0002024 - vasodilation

Pathways

Natriuretic peptide signaling pathway (Reactome: R-HSA-418594)
cGMP-PKG signaling pathway (KEGG: hsa04022)
Regulation of blood pressure (KEGG: hsa04924)
Bone remodeling (Reactome: R-HSA-8878166)

Protein Summary

Natriuretic peptide receptor 3 (NPR-C) is a 540-amino acid transmembrane protein encoded by NPR3. It consists of a large extracellular ligand-binding domain, a single transmembrane helix, and a short intracellular tail lacking guanylyl cyclase activity. The receptor binds ANP, BNP, and CNP with high affinity and mediates their internalization and lysosomal degradation. NPR-C also couples to Gi/o proteins to inhibit adenylyl cyclase and activate phospholipase C, modulating cell proliferation and fibrosis. The protein is heavily N-glycosylated and forms homodimers. Its expression in bone, vasculature, and kidney underpins its roles in skeletal growth, blood pressure regulation, and fluid homeostasis.

Related Products

Product name Cat.No. Species Gene ID
NPR3 Knockout HEK293 Cell Line EDJ-KQ14483 Human 4883 Details Get a Quote
NPR3 Knockout A-549 Cell Line EDJ-KQ44743 Human 4883 Details Get a Quote
NPR3 Knockout HeLa Cell Line EDC90131 Human 4883 Details Get a Quote
NPR3 Knockout HCT 116 Cell Line EDJ-KQ70977 Human 4883 Details Get a Quote
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