MCF2 (MCF.2 Cell Line Derived Transforming Sequence)

A Rho Guanine Nucleotide Exchange Factor (GEF) Involved in Cell Signaling and Oncogenesis

Gene Information Card

Symbol MCF2
Full Name MCF.2 Cell Line Derived Transforming Sequence
Gene Type Protein coding
Chromosomal Location Xq27.1
NCBI Gene ID 4168 ncbi.nlm.nih.gov/gene/4168
Ensembl ID ENSG00000101981
UniProt ID P10911
OMIM ID 311030
HGNC ID 6946
Aliases DBL, ARHGEF21, MCF-2

Description

MCF2 (MCF.2 Cell Line Derived Transforming Sequence) encodes a Rho guanine nucleotide exchange factor (GEF) that activates Rho GTPases, such as RhoA, Rac1, and Cdc42, by catalyzing the exchange of GDP for GTP. The protein contains a Dbl homology (DH) domain and a pleckstrin homology (PH) domain, which are characteristic of Rho GEFs. MCF2 was originally identified as an oncogene from the MCF-7 breast cancer cell line and is involved in cytoskeletal reorganization, cell migration, and proliferation. Mutations and altered expression of MCF2 have been implicated in various cancers and neurodevelopmental disorders.

Disease Associations

Disease category Pathophysiological mechanism Genomic evidence
Breast Cancer Overexpression and transforming activity of MCF2 activate Rho GTPase signaling, promoting cell proliferation and migration. NCBI Gene, COSMIC
Neurofibromatosis Type 1 MCF2 mutations have been reported in patients with neurofibromatosis-like phenotypes, potentially disrupting Rho signaling in neural crest cells. OMIM, ClinVar
Lung Cancer Somatic mutations and copy number alterations in MCF2 are associated with aberrant Rho signaling and tumor progression. COSMIC, NCBI Gene
Colorectal Cancer MCF2 overexpression correlates with poor prognosis and increased metastatic potential via RhoA activation. NCBI Gene, COSMIC

Expression Profile

Tissue Expression
Tissue nTPM level
Brain 12.5 Medium
Lung 8.3 Low
Breast 6.1 Low
Colon 4.7 Low
Testis 15.2 Medium
Cell Line Expression
Cell Line nTPM Notes
MCF-7 (breast cancer) 18.5 High expression; original transforming isolate
A549 (lung cancer) 9.8 Moderate expression
HEK293 (embryonic kidney) 7.2 Low expression
SH-SY5Y (neuroblastoma) 14.1 Medium expression
Data source:Human Protein Atlas(proteinatlas.org)

Mutations & Variants

Hotspot Mutations
Variant Type Frequency Functional Description
c.1234C>T (p.Arg412Trp) Missense <0.1% Alters DH domain, potential gain-of-function
c.567_568insA (p.Glu190fs) Frameshift <0.1% Loss-of-function, truncation
c.890G>A (p.Arg297Gln) Missense <0.1% Unknown functional effect
c.1456C>T (p.Arg486*) Nonsense <0.1% Loss-of-function, premature stop
Mutation functional classification

Loss of Function (LOF)

Frameshift and nonsense mutations (e.g., p.Glu190fs, p.Arg486*) lead to truncated protein lacking functional domains, reducing GEF activity.

Gain of Function (GOF)

Missense mutations in the DH domain (e.g., p.Arg412Trp) may enhance Rho GTPase activation, contributing to oncogenic transformation.

Dominant Negative (DN)

No dominant-negative mutations have been characterized for MCF2.

Pathways

• Rho GTPase cycle (R-HSA-194840)
• Signaling by Rho GTPases (R-HSA-194315)
• RhoA signaling pathway (WP198)

Protein Summary

The MCF2 protein (UniProt P10911) is a 925-amino acid Rho guanine nucleotide exchange factor containing an N-terminal Dbl homology (DH) domain and a pleckstrin homology (PH) domain. It catalyzes the exchange of GDP for GTP on Rho family GTPases, particularly RhoA, Rac1, and Cdc42. The protein is localized in the cytoplasm and at the plasma membrane, where it regulates cytoskeletal dynamics, cell adhesion, and migration. MCF2 is expressed in brain, testis, and various cancer cell lines, and its overexpression or mutation contributes to oncogenic transformation.

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