LTC4S
Leukotriene C4 Synthase
Gene Information Card
| Symbol | LTC4S |
|---|---|
| Full Name | Leukotriene C4 Synthase |
| Gene Type | protein-coding |
| Chromosomal Location | 5q35.3 |
| NCBI Gene ID | 4056 ncbi.nlm.nih.gov/gene/4056 |
| Ensembl ID | ENSG00000164111 |
| UniProt ID | Q16873 |
| OMIM ID | 246530 |
| HGNC ID | 6719 |
| Aliases | LTC4S, MGC33147, LTC4 synthase |
Description
LTC4S encodes leukotriene C4 synthase, an integral membrane protein that conjugates leukotriene A4 with reduced glutathione to form leukotriene C4. This enzyme is a key component of the 5-lipoxygenase pathway and is primarily expressed in eosinophils, mast cells, and macrophages. LTC4S activity is critical for the biosynthesis of cysteinyl leukotrienes (LTC4, LTD4, LTE4), which are potent mediators of bronchoconstriction, vascular permeability, and inflammation. Genetic variants in LTC4S have been associated with asthma susceptibility and response to leukotriene receptor antagonists.
Disease Associations
| Disease category | Pathophysiological mechanism | Genomic evidence |
|---|---|---|
| Asthma | Increased LTC4S expression leads to elevated cysteinyl leukotriene production, promoting airway inflammation and bronchoconstriction. | ClinVar, OMIM |
| Aspirin-Exacerbated Respiratory Disease (AERD) | Upregulation of LTC4S in nasal polyps and bronchial tissue correlates with enhanced leukotriene synthesis and sensitivity to aspirin. | OMIM, PubMed |
| Allergic Rhinitis | LTC4S polymorphisms influence leukotriene levels and nasal symptom severity. | NCBI Gene, ClinVar |
Expression Profile
Tissue Expression
| Tissue | nTPM | level |
|---|---|---|
| Lung | 12.3 | Medium |
| Spleen | 8.7 | Medium |
| Whole Blood | 5.1 | Low |
| Bone Marrow | 4.9 | Low |
| Small Intestine | 3.2 | Low |
Cell Line Expression
| Cell Line | nTPM | Notes |
|---|---|---|
| THP-1 (monocyte) | 15.2 | High expression in differentiated macrophages |
| HL-60 (promyeloblast) | 10.8 | Induced by DMSO differentiation |
| A549 (lung epithelial) | 2.1 | Low baseline expression |
Data source:Human Protein Atlas(proteinatlas.org)
Mutations & Variants
Hotspot Mutations
| Variant | Type | Frequency | Functional Description |
|---|---|---|---|
| rs730012 (-444 A>C) | SNP | 5-10% in Caucasians | Increased promoter activity and LTC4S expression; associated with asthma severity |
| c.109G>A (p.Gly37Ser) | Missense | <1% | Reduced enzyme activity in vitro; clinical significance uncertain |
| c.196C>T (p.Arg66Trp) | Missense | Rare | Loss of catalytic function; reported in AERD patients |
Mutation functional classification
Loss of Function (LOF)
c.196C>T (p.Arg66Trp) reduces LTC4S catalytic activity, impairing LTC4 synthesis.
Gain of Function (GOF)
rs730012 (-444 A>C) increases promoter activity, leading to elevated LTC4S expression and enhanced leukotriene production.
Dominant Negative (DN)
No dominant-negative mutations reported for LTC4S.
View complete mutation data:
Gene Ontology (GO)
Pathways
• Leukotriene biosynthesis (Reactome: R-HSA-2142691)
• Arachidonic acid metabolism (KEGG: hsa00590)
• Metabolism of lipids and lipoproteins (Reactome: R-HSA-556833)
Protein Summary
Leukotriene C4 synthase (LTC4S) is a 150-amino acid integral membrane protein localized to the nuclear envelope and endoplasmic reticulum. It belongs to the MAPEG (membrane-associated proteins in eicosanoid and glutathione metabolism) family. The enzyme catalyzes the conjugation of leukotriene A4 with glutathione to form leukotriene C4, the first committed step in cysteinyl leukotriene synthesis. LTC4S exists as a homotrimer and requires Mg2+ for activity. Its expression is regulated by cytokines (e.g., IL-4, IL-13) and transcription factors such as GATA-1. Structural studies reveal a four-helix bundle architecture with a glutathione-binding site. LTC4S is a therapeutic target for asthma and allergic inflammation; inhibitors such as zafirlukast and montelukast target downstream receptors rather than the enzyme itself.
Related Services
Related Products
| Product name | Cat.No. | Species | Gene ID | |
|---|---|---|---|---|
| LTC4S Knockout HEK293 Cell Line | EDJ-KQ5150 | Human | 4056 | Details Get a Quote |
| LTC4S Knockout HeLa Cell Line | EDJ-KQ53811 | Human | 4056 | Details Get a Quote |
| LTC4S Knockout A-549 Cell Line | EDJ-KQ62291 | Human | 4056 | Details Get a Quote |
| LTC4S Knockout HCT 116 Cell Line | EDJ-KQ70773 | Human | 4056 | Details Get a Quote |