KLF7: Krüppel-like Factor 7 – Transcriptional Regulator in Neurodevelopment and Metabolism

Comprehensive genomic and functional annotation of KLF7, a zinc-finger transcription factor implicated in neurological disorders, adipogenesis, and cancer.

Gene Information Card

Symbol KLF7
Full Name Krüppel-like factor 7 (ubiquitous)
Gene Type protein-coding
Chromosomal Location 2q33.3
NCBI Gene ID 8609 ncbi.nlm.nih.gov/gene/8609
Ensembl ID ENSG00000118263
UniProt ID O75895
OMIM ID 604865
HGNC ID 6350
Aliases UKLF, FLJ30611

Description

KLF7 (Krüppel-like factor 7) encodes a member of the Krüppel-like family of zinc-finger transcription factors. The protein contains three C2H2-type zinc fingers at the C-terminus and a transactivation domain at the N-terminus. KLF7 is ubiquitously expressed, with highest levels in skeletal muscle, adipose tissue, and brain. It regulates genes involved in cell cycle, differentiation, and metabolism, particularly in neurons and adipocytes. KLF7 has been associated with type 2 diabetes, obesity, neurodevelopmental disorders, and various cancers.

Disease Associations

Disease category Pathophysiological mechanism Genomic evidence
Type 2 Diabetes KLF7 variants affect insulin sensitivity and adipokine expression PMID: 19096309; GWAS catalog
Obesity KLF7 regulates adipogenesis and lipid metabolism PMID: 20534734
Neurodevelopmental Disorders KLF7 promotes neuronal differentiation and axon growth; dysregulation linked to intellectual disability PMID: 23545418
Colorectal Cancer KLF7 overexpression promotes tumor growth and metastasis PMID: 28708995
Breast Cancer KLF7 acts as an oncogene by regulating cell proliferation PMID: 31073040

Expression Profile

Tissue Expression
Tissue nTPM level
Skeletal Muscle 12.5 Medium
Adipose Tissue 10.8 Medium
Brain (cortex) 8.3 Low
Heart 7.1 Low
Liver 4.2 Not detected
Cell Line Expression
Cell Line nTPM Notes
HeLa 15.2 Cervical cancer cell line
HepG2 6.8 Hepatocellular carcinoma
SH-SY5Y 22.1 Neuroblastoma; high expression
3T3-L1 18.5 Adipocyte precursor; upregulated during differentiation
Data source:Human Protein Atlas(proteinatlas.org)

Mutations & Variants

Hotspot Mutations
Variant Type Frequency Functional Description
c.1018C>T (p.Arg340Cys) Missense 0.01% (gnomAD) Alters DNA-binding affinity; associated with metabolic traits
c.1246G>A (p.Gly416Ser) Missense 0.005% Reduces transcriptional activity; linked to obesity
c.1450_1451insA (p.Thr484Asnfs*12) Frameshift Rare Loss of function; reported in neurodevelopmental delay
Mutation functional classification

Loss of Function (LOF)

Frameshift and nonsense mutations (e.g., p.Thr484Asnfs*12) lead to truncated protein lacking zinc fingers, impairing DNA binding and transcriptional activation.

Gain of Function (GOF)

Missense variants in the transactivation domain (e.g., p.Ser95Leu) may enhance coactivator recruitment, increasing target gene expression in cancer.

Dominant Negative (DN)

Missense mutations in the zinc-finger region (e.g., p.Arg340Cys) can produce a protein that binds DNA but fails to activate transcription, interfering with wild-type KLF7 function.

Pathways

• Adipogenesis – regulation of PPARG and CEBPA
• Neurotrophin signaling – KLF7 promotes NGF-induced neurite outgrowth
• Cell cycle – KLF7 modulates CDKN1A (p21) expression
• MAPK signaling – KLF7 is phosphorylated by ERK1/2

Protein Summary

KLF7 is a 302-amino acid transcription factor with three C-terminal C2H2 zinc fingers that mediate sequence-specific DNA binding to GC-rich elements. The N-terminal domain contains a transactivation region rich in proline and serine residues. KLF7 is ubiquitously expressed and shuttles between cytoplasm and nucleus. It regulates genes involved in cell cycle arrest, differentiation, and metabolism. Post-translational modifications include phosphorylation and acetylation, which modulate its activity. Structural studies show that the zinc-finger domain adopts a canonical ββα fold.

Related Products

Product name Cat.No. Species Gene ID
KLF7 Knockout HEK293 Cell Line EDJ-KQ13946 Human 8609 Details Get a Quote
KLF7 Knockout HeLa Cell Line EDJ-KQ18066 Human 8609 Details Get a Quote
KLF7 Knockout A-549 Cell Line EDJ-KQ42584 Human 8609 Details Get a Quote
KLF7 Knockout HCT 116 Cell Line EDJ-KQ43861 Human 8609 Details Get a Quote
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