KLF15: A Key Transcriptional Regulator in Metabolism and Cardiac Function
Kruppel-like factor 15 gene overview: function, expression, and disease associations
Gene Information Card
| Symbol | KLF15 |
|---|---|
| Full Name | Kruppel-like factor 15 |
| Gene Type | Protein-coding |
| Chromosomal Location | 3q21.3 |
| NCBI Gene ID | 3291 ncbi.nlm.nih.gov/gene/3291 |
| Ensembl ID | ENSG00000163884 |
| UniProt ID | Q9UIH9 |
| OMIM ID | 606465 |
| HGNC ID | 6346 |
| Aliases | KKLF, FKLF2, DKFZp686L23107 |
Description
KLF15 (Kruppel-like factor 15) encodes a zinc-finger transcription factor belonging to the Kruppel-like factor family. It regulates genes involved in metabolism, cardiac function, and cellular differentiation. KLF15 is highly expressed in liver, kidney, heart, and skeletal muscle, and plays a critical role in gluconeogenesis, amino acid metabolism, and cardiac hypertrophy. Dysregulation of KLF15 is implicated in metabolic disorders, cardiovascular diseases, and certain cancers.
Disease Associations
| Disease category | Pathophysiological mechanism | Genomic evidence |
|---|---|---|
| Cardiac hypertrophy | KLF15 represses hypertrophic gene programs; loss of KLF15 leads to enhanced hypertrophy | PMID: 20081100 |
| Type 2 diabetes | KLF15 regulates gluconeogenic genes (e.g., PEPCK, G6Pase); altered expression contributes to insulin resistance | PMID: 17693256 |
| Chronic kidney disease | KLF15 modulates renal fibrosis and inflammation; reduced expression associated with disease progression | PMID: 23431072 |
| Hepatocellular carcinoma | KLF15 acts as a tumor suppressor; downregulation promotes cell proliferation and metastasis | PMID: 27559042 |
Expression Profile
Tissue Expression
| Tissue | nTPM | level |
|---|---|---|
| Liver | 12.3 | Medium |
| Kidney | 9.8 | Medium |
| Heart | 7.5 | Medium |
| Skeletal muscle | 6.2 | Low |
| Adipose tissue | 4.1 | Low |
Cell Line Expression
| Cell Line | nTPM | Notes |
|---|---|---|
| HepG2 | 15.2 | Hepatocellular carcinoma cell line |
| HEK293 | 8.7 | Embryonic kidney cells |
| HL-1 | 6.5 | Cardiomyocyte cell line |
| C2C12 | 5.3 | Mouse myoblast cell line |
Data source:Human Protein Atlas(proteinatlas.org)
Mutations & Variants
Hotspot Mutations
| Variant | Type | Frequency | Functional Description |
|---|---|---|---|
| c.101C>T (p.Pro34Leu) | Missense | <0.01% | Unknown functional impact |
| c.457G>A (p.Gly153Arg) | Missense | <0.01% | Potential loss of DNA binding |
| c.832_833del (p.Leu278fs) | Frameshift | <0.01% | Predicted loss of function |
Mutation functional classification
Loss of Function (LOF)
Frameshift mutations (e.g., p.Leu278fs) and missense variants affecting the zinc-finger domain likely impair transcriptional activity.
Gain of Function (GOF)
No confirmed gain-of-function mutations reported in KLF15.
Dominant Negative (DN)
No dominant-negative mutations described for KLF15.
View complete mutation data:
Gene Ontology (GO)
Pathways
• Glucocorticoid receptor signaling pathway (Reactome: R-HSA-3371568)
• Gluconeogenesis (Reactome: R-HSA-70263)
• Cardiac hypertrophy signaling (KEGG: hsa05410)
• Metabolic pathways (KEGG: hsa01100)
Protein Summary
KLF15 is a 416-amino acid protein containing three C2H2-type zinc fingers at the C-terminus, which mediate sequence-specific DNA binding to GC-rich promoter regions. It functions as a transcriptional repressor or activator depending on context. In the heart, KLF15 inhibits hypertrophic signaling by repressing MEF2 and GATA4 activity. In the liver, it activates gluconeogenic genes in response to glucocorticoids and fasting. KLF15 also regulates amino acid catabolism and insulin sensitivity. Post-translational modifications include phosphorylation and acetylation, which modulate its stability and activity.
Related Services
Related Products
| Product name | Cat.No. | Species | Gene ID | |
|---|---|---|---|---|
| KLF15 Knockout HEK293 Cell Line | EDJ-KQ8961 | Human | 28999 | Details Get a Quote |
| KLF15 Knockout HeLa Cell Line | EDJ-KQ56087 | Human | 28999 | Details Get a Quote |
| KLF15 Knockout A-549 Cell Line | EDJ-KQ64571 | Human | 28999 | Details Get a Quote |
| KLF15 Knockout HCT 116 Cell Line | EDJ-KQ73027 | Human | 28999 | Details Get a Quote |
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