ITGB6 Gene - Integrin Subunit Beta 6
Key mediator of epithelial-mesenchymal interactions and fibrosis
Gene Information Card
| Symbol | ITGB6 |
|---|---|
| Full Name | Integrin Subunit Beta 6 |
| Gene Type | Protein coding |
| Chromosomal Location | 2q24.2 |
| NCBI Gene ID | 3694 ncbi.nlm.nih.gov/gene/3694 |
| Ensembl ID | ENSG00000115221 |
| UniProt ID | P18564 |
| OMIM ID | 147558 |
| HGNC ID | 6154 |
| Aliases | MPSD7, integrin beta-6 |
Description
ITGB6 encodes integrin beta-6, a transmembrane receptor subunit that heterodimerizes with integrin alpha-v to form the αvβ6 integrin. This integrin is predominantly expressed on epithelial cells and binds to extracellular matrix proteins such as fibronectin and tenascin. It plays critical roles in epithelial cell adhesion, migration, wound healing, and activation of latent TGF-β. Dysregulation of ITGB6 is implicated in fibrosis, chronic inflammation, and cancer progression.
Disease Associations
| Disease category | Pathophysiological mechanism | Genomic evidence |
|---|---|---|
| Idiopathic Pulmonary Fibrosis | αvβ6 integrin activates latent TGF-β in lung epithelium, driving fibrotic remodeling | PMID: 21725309 |
| Oral Squamous Cell Carcinoma | Overexpression of ITGB6 promotes invasion and metastasis via TGF-β activation | PMID: 23359680 |
| Chronic Kidney Disease | Increased αvβ6 expression in tubular epithelium correlates with fibrosis | PMID: 23962962 |
| Ulcerative Colitis | Upregulated ITGB6 in colonic epithelium contributes to inflammation and fibrosis | PMID: 25687263 |
Expression Profile
Tissue Expression
| Tissue | nTPM | level |
|---|---|---|
| Lung | 2.3 | Low |
| Kidney | 1.8 | Low |
| Skin | 3.1 | Medium |
| Oral Mucosa | 4.5 | Medium |
| Colon | 1.2 | Low |
Cell Line Expression
| Cell Line | nTPM | Notes |
|---|---|---|
| A549 (lung carcinoma) | 5.6 | High expression |
| HaCaT (keratinocyte) | 4.2 | Moderate expression |
| HEK293 (embryonic kidney) | 0.8 | Low expression |
| SCC-25 (oral squamous carcinoma) | 7.1 | Very high expression |
Data source:Human Protein Atlas(proteinatlas.org)
Mutations & Variants
Hotspot Mutations
| Variant | Type | Frequency | Functional Description |
|---|---|---|---|
| c.442G>A (p.Gly148Arg) | Missense | <0.01% | Unknown functional effect |
| c.1015C>T (p.Arg339Trp) | Missense | <0.01% | Reported in cancer samples |
| c.1234_1235insA | Frameshift | <0.01% | Predicted loss of function |
Mutation functional classification
Loss of Function (LOF)
Frameshift and nonsense mutations predicted to truncate the protein, impairing integrin dimerization and signaling.
Gain of Function (GOF)
Missense mutations in the extracellular domain may enhance ligand binding or TGF-β activation, though not well characterized.
Dominant Negative (DN)
No dominant negative mutations currently documented.
View complete mutation data:
Gene Ontology (GO)
Pathways
• Integrin signaling pathway (KEGG: hsa04510)
• TGF-beta signaling pathway (KEGG: hsa04350)
• Focal adhesion (KEGG: hsa04510)
Protein Summary
Integrin beta-6 (UniProt P18564) is a 788-amino acid transmembrane protein with a large extracellular domain, a single transmembrane helix, and a short cytoplasmic tail. It exclusively pairs with integrin alpha-v to form the αvβ6 receptor. The extracellular domain contains von Willebrand factor type A domain and multiple integrin beta-6-specific motifs. The cytoplasmic domain contains an NPXY motif critical for signaling. αvβ6 binds to RGD motifs in fibronectin, tenascin, and latency-associated peptide (LAP) of TGF-β, thereby activating TGF-β. This integrin is not expressed in normal adult epithelium but is induced during wound healing and in pathological states such as fibrosis and cancer.
Related Services
Related Products
| Product name | Cat.No. | Species | Gene ID | |
|---|---|---|---|---|
| ITGB6 Knockout HEK293 Cell Line | EDJ-KQ821 | Human | 3694 | Details Get a Quote |
| ITGB6 Knockout A-549 Cell Line | EDJ-KQ19576 | Human | 3694 | Details Get a Quote |
| ITGB6 Knockout HeLa Cell Line | EDJ-KQ53681 | Human | 3694 | Details Get a Quote |
| ITGB6 Knockout HCT 116 Cell Line | EDJ-KQ70646 | Human | 3694 | Details Get a Quote |
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