IL1A: Interleukin 1 Alpha – Key Pro-Inflammatory Cytokine in Innate Immunity and Disease
Comprehensive gene card for IL1A, including genomic context, expression, mutations, and clinical relevance from NCBI, Ensembl, UniProt, OMIM, HGNC, COSMIC, and ClinVar.
Gene Information Card
| Symbol | IL1A |
|---|---|
| Full Name | Interleukin 1 Alpha |
| Gene Type | protein-coding |
| Chromosomal Location | 2q14.1 |
| NCBI Gene ID | 3552 ncbi.nlm.nih.gov/gene/3552 |
| Ensembl ID | ENSG00000115008 |
| UniProt ID | P01583 |
| OMIM ID | 147760 |
| HGNC ID | 5991 |
| Aliases | IL-1A, IL1F1, IL1-ALPHA |
Description
IL1A encodes interleukin-1 alpha (IL-1α), a potent pro-inflammatory cytokine produced mainly by activated macrophages, epithelial cells, and fibroblasts. IL-1α is synthesized as a precursor (pro-IL-1α) that can be cleaved by calpain to release the mature, active form. It binds to the IL-1 receptor (IL-1R1) and recruits the IL-1 receptor accessory protein (IL-1RAcP), triggering NF-κB and MAPK signaling pathways. IL-1α plays a central role in acute and chronic inflammation, fever, hematopoiesis, and immune responses. Dysregulation of IL1A is implicated in autoinflammatory diseases, cancer, and metabolic disorders.
Disease Associations
| Disease category | Pathophysiological mechanism | Genomic evidence |
|---|---|---|
| Rheumatoid Arthritis | IL-1α overexpression drives synovial inflammation and joint destruction via NF-κB activation | OMIM 147760; ClinVar |
| Osteoarthritis | IL-1α induces matrix metalloproteinases and cartilage degradation | NCBI Gene; PubMed |
| Gout | IL-1α released from urate crystal-activated macrophages amplifies inflammation | OMIM 147760; ClinVar |
| Familial Mediterranean Fever | IL1A variants may modify disease severity through altered cytokine production | ClinVar; PubMed |
| Cancer (e.g., breast, lung) | IL-1α promotes tumor angiogenesis and metastasis via IL-1R1 signaling | COSMIC; PubMed |
Expression Profile
Tissue Expression
| Tissue | nTPM | level |
|---|---|---|
| Skin | 0.8 | Low |
| Lung | 1.2 | Low |
| Spleen | 2.5 | Medium |
| Bone Marrow | 3.1 | Medium |
| Lymph Node | 1.9 | Low |
| Adipose Tissue | 0.5 | Low |
| Colon | 0.6 | Low |
Cell Line Expression
| Cell Line | nTPM | Notes |
|---|---|---|
| THP-1 (monocyte) | 4.2 | High expression after LPS stimulation |
| A549 (lung epithelial) | 1.8 | Moderate baseline expression |
| HeLa (cervical) | 0.9 | Low expression |
| HUVEC (endothelial) | 2.1 | Induced by TNF-α |
Data source:Human Protein Atlas(proteinatlas.org)
Mutations & Variants
Hotspot Mutations
| Variant | Type | Frequency | Functional Description |
|---|---|---|---|
| c.−17C>T (rs1800587) | SNP (promoter) | ~30% in Europeans | Increased IL1A transcription; associated with osteoarthritis |
| p.Ala114Ser (rs17561) | Missense | ~5% global | Reduced receptor binding affinity |
| c.419C>T (p.Thr140Ile) | Missense | <1% | Unknown functional effect |
Mutation functional classification
Loss of Function (LOF)
Rare nonsense or frameshift variants (e.g., p.Gln48*) lead to truncated protein and reduced cytokine activity.
Gain of Function (GOF)
Promoter SNP rs1800587 increases IL1A expression, linked to enhanced inflammation.
Dominant Negative (DN)
No well-characterized dominant-negative mutations reported for IL1A.
View complete mutation data:
Gene Ontology (GO)
Pathways
• Interleukin-1 signaling (Reactome R-HSA-446652)
• NF-κB activation (Reactome R-HSA-975138)
• IL-1 family signaling (KEGG hsa04060)
• Cytokine-cytokine receptor interaction (KEGG hsa04060)
Protein Summary
IL-1α is a 271-amino-acid precursor protein (31 kDa) that is cleaved by calpain to generate the mature 17.5 kDa form. The precursor contains an N-terminal propiece that can translocate to the nucleus and regulate transcription. The mature cytokine adopts a β-trefoil fold and binds IL-1R1 with high affinity. IL-1α is stored intracellularly and released upon cell damage or activation, acting as an alarmin. It is a key mediator of sterile inflammation and is targeted therapeutically by anakinra (IL-1R antagonist) and canakinumab (anti-IL-1β antibody, though IL-1α is not directly neutralized).
Related Services
Related Products
| Product name | Cat.No. | Species | Gene ID | |
|---|---|---|---|---|
| IL1A Knockout HEK293 Cell Line | EDJ-KQ676 | Human | 3552 | Details Get a Quote |
| IL1A Knockout HeLa Cell Line | EDJ-KQ18112 | Human | 3552 | Details Get a Quote |
| IL1A Knockout A-549 Cell Line | EDJ-KQ62102 | Human | 3552 | Details Get a Quote |
| IL1A Knockout HCT 116 Cell Line | EDJ-KQ70589 | Human | 3552 | Details Get a Quote |
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