IKBKB Gene: Inhibitor of Nuclear Factor Kappa B Kinase Subunit Beta
A key regulator of NF-κB signaling, inflammation, and immune response
Gene Information Card
| Symbol | IKBKB |
|---|---|
| Full Name | Inhibitor of Nuclear Factor Kappa B Kinase Subunit Beta |
| Gene Type | Protein coding |
| Chromosomal Location | 8p11.21 |
| NCBI Gene ID | 3551 ncbi.nlm.nih.gov/gene/3551 |
| Ensembl ID | ENSG00000104365 |
| UniProt ID | O14920 |
| OMIM ID | 603258 |
| HGNC ID | 5967 |
| Aliases | IKK-beta, IKK2, IKKB, NFKBIKB |
Description
IKBKB encodes IKK-beta (inhibitor of nuclear factor kappa-B kinase subunit beta), a serine/threonine kinase that forms the core of the IKK complex. Upon activation by upstream signals, IKK-beta phosphorylates inhibitors of NF-κB (IκBs), leading to their ubiquitin-dependent degradation and subsequent nuclear translocation of NF-κB transcription factors. This pathway regulates expression of genes involved in inflammation, immunity, cell survival, and proliferation. Mutations in IKBKB cause severe combined immunodeficiency (SCID) and are implicated in various cancers.
Disease Associations
| Disease category | Pathophysiological mechanism | Genomic evidence |
|---|---|---|
| Severe combined immunodeficiency (SCID) due to IKBKB deficiency | Loss-of-function mutations impair NF-κB activation, leading to defective T-cell and B-cell function | OMIM #615615 |
| Immunodeficiency 15 (IMD15) | Hypomorphic mutations reduce but do not abolish IKK-beta activity, causing combined immunodeficiency with variable severity | OMIM #618204 |
| Hepatocellular carcinoma | Somatic gain-of-function mutations or overexpression of IKBKB promote NF-κB-driven cell proliferation and survival | COSMIC, PMID: 17625568 |
| Breast cancer | IKBKB amplification or activation contributes to NF-κB-mediated oncogenic signaling | COSMIC, PMID: 21746835 |
Expression Profile
Tissue Expression
| Tissue | nTPM | level |
|---|---|---|
| Lymph node | 16.8 | High |
| Spleen | 15.2 | High |
| Bone marrow | 13.5 | High |
| Lung | 9.1 | Medium |
| Liver | 6.4 | Medium |
| Brain | 2.3 | Low |
Cell Line Expression
| Cell Line | nTPM | Notes |
|---|---|---|
| HEK 293 | 18.5 | High expression in embryonic kidney cells |
| Jurkat | 22.1 | High expression in T-cell leukemia line |
| HeLa | 14.3 | High expression in cervical cancer cells |
| HepG2 | 11.2 | Medium expression in hepatocellular carcinoma |
Data source:Human Protein Atlas(proteinatlas.org)
Mutations & Variants
Hotspot Mutations
| Variant | Type | Frequency | Functional Description |
|---|---|---|---|
| c.1292G>A (p.Arg431Gln) | Missense | Rare | Loss of kinase activity; associated with SCID |
| c.1670A>G (p.Tyr557Cys) | Missense | Rare | Hypomorphic; associated with IMD15 |
| c.1192C>T (p.Arg398Trp) | Missense | Rare | Dominant-negative effect; immunodeficiency |
| c.1690G>A (p.Glu564Lys) | Missense | Somatic (cancer) | Gain-of-function; found in hepatocellular carcinoma |
Mutation functional classification
Loss of Function (LOF)
Loss-of-function mutations (e.g., p.Arg431Gln) abolish kinase activity, preventing IκB phosphorylation and NF-κB activation, leading to SCID.
Gain of Function (GOF)
Gain-of-function mutations (e.g., p.Glu564Lys) enhance IKK-beta activity, promoting constitutive NF-κB signaling and oncogenesis.
Dominant Negative (DN)
Dominant-negative mutations (e.g., p.Arg398Trp) produce a defective protein that interferes with wild-type IKK-beta function, impairing NF-κB activation.
View complete mutation data:
Gene Ontology (GO)
Pathways
• NF-kappa B signaling pathway (KEGG: hsa04064)
• Toll-like receptor signaling pathway (KEGG: hsa04620)
• TNF signaling pathway (KEGG: hsa04668)
• RIG-I-like receptor signaling pathway (KEGG: hsa04622)
• B cell receptor signaling pathway (KEGG: hsa04662)
• T cell receptor signaling pathway (KEGG: hsa04660)
Protein Summary
IKK-beta (UniProt O14920) is a 756-amino-acid serine/threonine kinase containing an N-terminal kinase domain, a ubiquitin-like domain (ULD), and a C-terminal NEMO-binding domain (NBD). It forms a heterodimer with IKK-alpha and interacts with the regulatory subunit NEMO (IKK-gamma) to form the IKK complex. Activation occurs via phosphorylation at Ser177 and Ser181 in the activation loop. IKK-beta is the primary kinase responsible for IκB phosphorylation in the canonical NF-κB pathway. Its activity is tightly regulated; dysregulation contributes to inflammatory diseases, immunodeficiency, and cancer.
Related Services
Related Products
| Product name | Cat.No. | Species | Gene ID | |
|---|---|---|---|---|
| IKBKB Knockout HEK293 Cell Line | EDJ-KQ566 | Human | 3551 | Details Get a Quote |
| IKBKB Knockout A-549 Cell Line | EDJ-KQ18953 | Human | 3551 | Details Get a Quote |
| IKBKB Knockout HCT 116 Cell Line | EDJ-KQ18954 | Human | 3551 | Details Get a Quote |
| IKBKB Knockout HeLa Cell Line | EDJ-KQ18955 | Human | 3551 | Details Get a Quote |
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