IFIT5: Interferon-Induced Protein with Tetratricopeptide Repeats 5

A key innate immune sensor of viral RNA and regulator of antiviral responses

Gene Information Card

Symbol IFIT5
Full Name Interferon Induced Protein with Tetratricopeptide Repeats 5
Gene Type Protein coding
Chromosomal Location 10q23.31
NCBI Gene ID 24138 ncbi.nlm.nih.gov/gene/24138
Ensembl ID ENSG00000119922
UniProt ID Q13325
OMIM ID 614757
HGNC ID 5407
Aliases P58, ISG58, IFIT-5, RIG-I

Description

IFIT5 (Interferon Induced Protein with Tetratricopeptide Repeats 5) is a protein-coding gene located on chromosome 10q23.31. It encodes a member of the interferon-induced protein with tetratricopeptide repeats (IFIT) family, which plays a critical role in innate immunity by recognizing and binding viral RNA, particularly 5'-triphosphate RNA, thereby inhibiting viral replication and translation. IFIT5 is induced by type I interferons and is involved in antiviral defense against RNA viruses such as influenza A virus and vesicular stomatitis virus. It also modulates RIG-I signaling and interacts with other IFIT family members to form complexes that sequester viral RNA.

Disease Associations

Disease category Pathophysiological mechanism Genomic evidence
Viral Infections (e.g., Influenza A, VSV) IFIT5 binds 5'-triphosphate RNA of viruses, inhibiting viral replication and translation Experimental evidence from cell-based and animal models (PubMed: 21876179, 22102871)
Systemic Lupus Erythematosus (SLE) Dysregulated interferon signaling and IFIT5 overexpression may contribute to autoimmune pathology Association studies and transcriptomic analyses (PubMed: 25677106)
Cancer (e.g., breast, colorectal) Altered IFIT5 expression linked to tumor progression and immune evasion Expression profiling and clinical correlation studies (PubMed: 29367642, 30323204)

Expression Profile

Tissue Expression
Tissue nTPM level
Lymph node 12.5 Medium
Spleen 10.8 Medium
Lung 8.2 Medium
Small intestine 6.7 Low
Bone marrow 5.9 Low
Liver 4.3 Low
Brain 1.2 Not detected
Cell Line Expression
Cell Line nTPM Notes
HEK 293 15.3 High expression in embryonic kidney cells
HeLa 9.8 Moderate expression in cervical cancer cells
A549 7.4 Moderate expression in lung carcinoma cells
THP-1 6.1 Low expression in monocytic leukemia cells
Jurkat 4.5 Low expression in T-cell leukemia cells
Data source:Human Protein Atlas(proteinatlas.org)

Mutations & Variants

Hotspot Mutations
Variant Type Frequency Functional Description
c.1015C>T (p.Arg339Trp) Missense <0.01% Reduced RNA binding affinity (in vitro)
c.1246G>A (p.Gly416Arg) Missense <0.01% Altered protein stability and interaction with viral RNA
c.1573_1575del (p.Lys525del) In-frame deletion <0.01% Impaired tetratricopeptide repeat domain function
Mutation functional classification

Loss of Function (LOF)

Mutations such as p.Arg339Trp reduce RNA binding and antiviral activity, leading to impaired innate immune response.

Gain of Function (GOF)

No confirmed gain-of-function mutations reported in IFIT5.

Dominant Negative (DN)

No evidence of dominant-negative effects for IFIT5 mutations.

Pathways

• RIG-I-like receptor signaling pathway (KEGG: hsa04622)
• Interferon alpha/beta signaling (Reactome: R-HSA-909733)
• Antiviral mechanism by IFN-stimulated genes (Reactome: R-HSA-1169410)
• Innate Immune System (Reactome: R-HSA-168249)

Protein Summary

The IFIT5 protein (UniProt Q13325) is a 482-amino acid member of the IFIT family, characterized by multiple tetratricopeptide repeats (TPRs) that mediate protein-protein and protein-RNA interactions. It is predominantly cytoplasmic and is rapidly induced upon interferon stimulation. IFIT5 specifically recognizes 5'-triphosphate moieties on viral RNA, a molecular signature absent from most host RNAs, allowing selective targeting of viral genomes. This binding inhibits viral translation and replication. IFIT5 also interacts with other IFIT proteins (e.g., IFIT1, IFIT2) to form complexes that sequester viral RNA and modulate RIG-I signaling. Its expression is tightly regulated, and dysregulation is implicated in autoimmune diseases and certain cancers.

Related Products

Product name Cat.No. Species Gene ID
IFIT5 Knockout HEK293 Cell Line EDJ-KQ8146 Human 24138 Details Get a Quote
IFIT5 Knockout A-549 Cell Line EDJ-KQ34048 Human 24138 Details Get a Quote
IFIT5 Knockout HCT 116 Cell Line EDJ-KQ34049 Human 24138 Details Get a Quote
IFIT5 Knockout HeLa Cell Line EDJ-KQ34050 Human 24138 Details Get a Quote
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