FBXW7 (F-Box and WD Repeat Domain Containing 7)
A tumor suppressor gene encoding a substrate recognition component of the SCF ubiquitin ligase complex, frequently mutated in cancer.
Gene Information Card
| Symbol | FBXW7 |
|---|---|
| Full Name | F-Box and WD Repeat Domain Containing 7 |
| Gene Type | Protein coding |
| Chromosomal Location | 4q31.3 |
| NCBI Gene ID | 55294 ncbi.nlm.nih.gov/gene/55294 |
| Ensembl ID | ENSG00000109610 |
| UniProt ID | Q969H0 |
| OMIM ID | 606278 |
| HGNC ID | 13612 |
| Aliases | FBW7, FBXW6, AGO, CDC4, hCDC4, SEL-10 |
Description
FBXW7 (F-box and WD repeat domain containing 7) encodes a member of the F-box protein family, which functions as the substrate recognition component of the SCF (SKP1-CUL1-F-box protein) ubiquitin ligase complex. FBXW7 targets several oncoproteins for ubiquitination and proteasomal degradation, including cyclin E (CCNE1), MYC, JUN, NOTCH1, and mTOR. Loss-of-function mutations in FBXW7 lead to the accumulation of these substrates, promoting uncontrolled cell proliferation and tumorigenesis. FBXW7 is a well-established tumor suppressor gene, with somatic mutations frequently identified in T-cell acute lymphoblastic leukemia (T-ALL), colorectal cancer, endometrial cancer, and other malignancies.
Disease Associations
| Disease category | Pathophysiological mechanism | Genomic evidence |
|---|---|---|
| T-cell acute lymphoblastic leukemia (T-ALL) | Loss-of-function mutations impair degradation of NOTCH1 and MYC, driving leukemogenesis. | COSMIC, ClinVar, NCBI |
| Colorectal cancer | Inactivating mutations lead to cyclin E and MYC accumulation, promoting genomic instability. | COSMIC, ClinVar, NCBI |
| Endometrial cancer | FBXW7 mutations disrupt SCF complex function, contributing to tumor progression. | COSMIC, ClinVar, NCBI |
| Bladder cancer | Recurrent missense mutations in the WD40 domain reduce substrate binding. | COSMIC, ClinVar |
| Pancreatic cancer | FBXW7 loss correlates with poor prognosis and increased MYC activity. | COSMIC, NCBI |
Expression Profile
Tissue Expression
| Tissue | nTPM | level |
|---|---|---|
| Adipose tissue | 8.2 | Medium |
| Brain cortex | 6.5 | Low |
| Colon | 12.1 | Medium |
| Endometrium | 14.3 | Medium |
| Heart muscle | 5.8 | Low |
| Kidney | 9.7 | Medium |
| Liver | 7.4 | Low |
| Lung | 11.0 | Medium |
| Lymph node | 15.6 | Medium |
| Ovary | 10.2 | Medium |
| Pancreas | 6.1 | Low |
| Skin | 8.9 | Medium |
| Small intestine | 13.5 | Medium |
| Spleen | 16.2 | Medium |
| Stomach | 9.3 | Medium |
| Testis | 18.7 | High |
| Thymus | 14.8 | Medium |
| Thyroid | 7.2 | Low |
Cell Line Expression
| Cell Line | nTPM | Notes |
|---|---|---|
| HEK 293 | 12.5 | Embryonic kidney cells; moderate expression |
| HeLa | 15.3 | Cervical carcinoma; high expression |
| K562 | 10.8 | Chronic myeloid leukemia; moderate expression |
| MCF7 | 9.1 | Breast adenocarcinoma; moderate expression |
| A549 | 11.4 | Lung carcinoma; moderate expression |
| HCT116 | 14.2 | Colorectal carcinoma; high expression |
| Jurkat | 13.7 | T-cell leukemia; high expression |
Data source:Human Protein Atlas(proteinatlas.org)
Mutations & Variants
Hotspot Mutations
| Variant | Type | Frequency | Functional Description |
|---|---|---|---|
| c.1513C>T (p.Arg505Cys) | Missense | Recurrent in T-ALL and colorectal cancer | Reduces substrate binding affinity; loss of function |
| c.1394G>A (p.Arg465His) | Missense | Common in endometrial cancer | Impairs WD40 domain; dominant-negative effect |
| c.1145_1146del (p.Leu382fs) | Frameshift | Rare; reported in colorectal cancer | Truncation; complete loss of function |
| c.1741C>T (p.Arg581*) | Nonsense | Observed in bladder cancer | Premature stop; loss of function |
| c.943C>T (p.Arg315Trp) | Missense | Found in T-ALL | Disrupts F-box domain; loss of function |
Mutation functional classification
Loss of Function (LOF)
Most FBXW7 mutations are loss-of-function, leading to impaired ubiquitination and accumulation of oncogenic substrates such as MYC, cyclin E, and NOTCH1.
Gain of Function (GOF)
No well-characterized gain-of-function mutations have been reported for FBXW7.
Dominant Negative (DN)
Certain missense mutations (e.g., p.Arg465His) in the WD40 domain can exert dominant-negative effects by forming inactive SCF complexes.
View complete mutation data:
Gene Ontology (GO)
| • ubiquitin-protein transferase activity (GO:0004842) | • protein binding (GO:0005515) |
| • SCF-dependent proteasomal ubiquitin-dependent protein catabolic process (GO:0031146) | • cell cycle (GO:0007049) |
| • Notch signaling pathway (GO:0007219) | • negative regulation of cell proliferation (GO:0008285) |
| • WD40 repeat domain binding (GO:0071987) |
Pathways
• SCF ubiquitin ligase complex (Reactome: R-HSA-8951664)
• Notch signaling (KEGG: hsa04330)
• Cell cycle (KEGG: hsa04110)
• mTOR signaling (KEGG: hsa04150)
• p53 signaling (KEGG: hsa04115)
• Ubiquitin mediated proteolysis (KEGG: hsa04120)
Protein Summary
FBXW7 is a 707-amino acid protein containing an N-terminal F-box domain and seven C-terminal WD40 repeats. The F-box domain mediates interaction with SKP1, while the WD40 repeats form a beta-propeller structure that recognizes phosphorylated degrons on target proteins. FBXW7 is predominantly nuclear and acts as a tumor suppressor by targeting key oncoproteins for ubiquitin-dependent degradation. Its loss leads to substrate stabilization and contributes to oncogenesis in multiple cancer types.
Related Services
Related Products
| Product name | Cat.No. | Species | Gene ID | |
|---|---|---|---|---|
| FBXW7 Knockout HEK293 Cell Line | EDJ-KQ17874 | Human | 55294 | Details Get a Quote |
| FBXW7 Knockout HCT 116 Cell Line | EDJ-KQ17987 | Human | 55294 | Details Get a Quote |
| FBXW7 Knockout A-549 Cell Line | EDJ-KQ43048 | Human | 55294 | Details Get a Quote |
| FBXW7 Knockout HeLa Cell Line | EDC90252 | Human | 55294 | Details Get a Quote |
| FBXW7 Knockout 5637 Cell Line | EDJ-KZ248 | Human | 55294 | Details Get a Quote |
| FBXW7 Knockout SW480 Cell Line | EDJ-KZ249 | Human | 55294 | Details Get a Quote |
| FBXW7 (p.S668G) Point Mutation in HAP1 Cell Line | EDC03482 | Human | 55294 | Details Get a Quote |
| FBXW7 (p.L152=) Point Mutation in HAP1 Cell Line | EDC03483 | Human | 55294 | Details Get a Quote |
| FBXW7 Knockout HEK293T Cell Line | EDJ-KQ78161 | Human | 55294 | Details Get a Quote |
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