FBXW7 (F-Box and WD Repeat Domain Containing 7)

A tumor suppressor gene encoding a substrate recognition component of the SCF ubiquitin ligase complex, frequently mutated in cancer.

Gene Information Card

Symbol FBXW7
Full Name F-Box and WD Repeat Domain Containing 7
Gene Type Protein coding
Chromosomal Location 4q31.3
NCBI Gene ID 55294 ncbi.nlm.nih.gov/gene/55294
Ensembl ID ENSG00000109610
UniProt ID Q969H0
OMIM ID 606278
HGNC ID 13612
Aliases FBW7, FBXW6, AGO, CDC4, hCDC4, SEL-10

Description

FBXW7 (F-box and WD repeat domain containing 7) encodes a member of the F-box protein family, which functions as the substrate recognition component of the SCF (SKP1-CUL1-F-box protein) ubiquitin ligase complex. FBXW7 targets several oncoproteins for ubiquitination and proteasomal degradation, including cyclin E (CCNE1), MYC, JUN, NOTCH1, and mTOR. Loss-of-function mutations in FBXW7 lead to the accumulation of these substrates, promoting uncontrolled cell proliferation and tumorigenesis. FBXW7 is a well-established tumor suppressor gene, with somatic mutations frequently identified in T-cell acute lymphoblastic leukemia (T-ALL), colorectal cancer, endometrial cancer, and other malignancies.

Disease Associations

Disease category Pathophysiological mechanism Genomic evidence
T-cell acute lymphoblastic leukemia (T-ALL) Loss-of-function mutations impair degradation of NOTCH1 and MYC, driving leukemogenesis. COSMIC, ClinVar, NCBI
Colorectal cancer Inactivating mutations lead to cyclin E and MYC accumulation, promoting genomic instability. COSMIC, ClinVar, NCBI
Endometrial cancer FBXW7 mutations disrupt SCF complex function, contributing to tumor progression. COSMIC, ClinVar, NCBI
Bladder cancer Recurrent missense mutations in the WD40 domain reduce substrate binding. COSMIC, ClinVar
Pancreatic cancer FBXW7 loss correlates with poor prognosis and increased MYC activity. COSMIC, NCBI

Expression Profile

Tissue Expression
Tissue nTPM level
Adipose tissue 8.2 Medium
Brain cortex 6.5 Low
Colon 12.1 Medium
Endometrium 14.3 Medium
Heart muscle 5.8 Low
Kidney 9.7 Medium
Liver 7.4 Low
Lung 11.0 Medium
Lymph node 15.6 Medium
Ovary 10.2 Medium
Pancreas 6.1 Low
Skin 8.9 Medium
Small intestine 13.5 Medium
Spleen 16.2 Medium
Stomach 9.3 Medium
Testis 18.7 High
Thymus 14.8 Medium
Thyroid 7.2 Low
Cell Line Expression
Cell Line nTPM Notes
HEK 293 12.5 Embryonic kidney cells; moderate expression
HeLa 15.3 Cervical carcinoma; high expression
K562 10.8 Chronic myeloid leukemia; moderate expression
MCF7 9.1 Breast adenocarcinoma; moderate expression
A549 11.4 Lung carcinoma; moderate expression
HCT116 14.2 Colorectal carcinoma; high expression
Jurkat 13.7 T-cell leukemia; high expression
Data source:Human Protein Atlas(proteinatlas.org)

Mutations & Variants

Hotspot Mutations
Variant Type Frequency Functional Description
c.1513C>T (p.Arg505Cys) Missense Recurrent in T-ALL and colorectal cancer Reduces substrate binding affinity; loss of function
c.1394G>A (p.Arg465His) Missense Common in endometrial cancer Impairs WD40 domain; dominant-negative effect
c.1145_1146del (p.Leu382fs) Frameshift Rare; reported in colorectal cancer Truncation; complete loss of function
c.1741C>T (p.Arg581*) Nonsense Observed in bladder cancer Premature stop; loss of function
c.943C>T (p.Arg315Trp) Missense Found in T-ALL Disrupts F-box domain; loss of function
Mutation functional classification

Loss of Function (LOF)

Most FBXW7 mutations are loss-of-function, leading to impaired ubiquitination and accumulation of oncogenic substrates such as MYC, cyclin E, and NOTCH1.

Gain of Function (GOF)

No well-characterized gain-of-function mutations have been reported for FBXW7.

Dominant Negative (DN)

Certain missense mutations (e.g., p.Arg465His) in the WD40 domain can exert dominant-negative effects by forming inactive SCF complexes.

Gene Ontology (GO)

• ubiquitin-protein transferase activity (GO:0004842) • protein binding (GO:0005515)
• SCF-dependent proteasomal ubiquitin-dependent protein catabolic process (GO:0031146) • cell cycle (GO:0007049)
• Notch signaling pathway (GO:0007219) • negative regulation of cell proliferation (GO:0008285)
• WD40 repeat domain binding (GO:0071987)

Pathways

SCF ubiquitin ligase complex (Reactome: R-HSA-8951664)
Notch signaling (KEGG: hsa04330)
Cell cycle (KEGG: hsa04110)
mTOR signaling (KEGG: hsa04150)
p53 signaling (KEGG: hsa04115)
Ubiquitin mediated proteolysis (KEGG: hsa04120)

Protein Summary

FBXW7 is a 707-amino acid protein containing an N-terminal F-box domain and seven C-terminal WD40 repeats. The F-box domain mediates interaction with SKP1, while the WD40 repeats form a beta-propeller structure that recognizes phosphorylated degrons on target proteins. FBXW7 is predominantly nuclear and acts as a tumor suppressor by targeting key oncoproteins for ubiquitin-dependent degradation. Its loss leads to substrate stabilization and contributes to oncogenesis in multiple cancer types.

Related Products

Product name Cat.No. Species Gene ID
FBXW7 Knockout HEK293 Cell Line EDJ-KQ17874 Human 55294 Details Get a Quote
FBXW7 Knockout HCT 116 Cell Line EDJ-KQ17987 Human 55294 Details Get a Quote
FBXW7 Knockout A-549 Cell Line EDJ-KQ43048 Human 55294 Details Get a Quote
FBXW7 Knockout HeLa Cell Line EDC90252 Human 55294 Details Get a Quote
FBXW7 Knockout 5637 Cell Line EDJ-KZ248 Human 55294 Details Get a Quote
FBXW7 Knockout SW480 Cell Line EDJ-KZ249 Human 55294 Details Get a Quote
FBXW7 (p.S668G) Point Mutation in HAP1 Cell Line EDC03482 Human 55294 Details Get a Quote
FBXW7 (p.L152=) Point Mutation in HAP1 Cell Line EDC03483 Human 55294 Details Get a Quote
FBXW7 Knockout HEK293T Cell Line EDJ-KQ78161 Human 55294 Details Get a Quote
Displaying Records 1 To 9 Of 9 Records
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