FBXO4 Gene - F-Box Protein 4

A key component of the SCF ubiquitin ligase complex involved in cell cycle regulation and tumor suppression

Gene Information Card

Symbol FBXO4
Full Name F-box protein 4
Gene Type protein-coding
Chromosomal Location 5p12
NCBI Gene ID 26272 ncbi.nlm.nih.gov/gene/26272
Ensembl ID ENSG00000164167
UniProt ID Q9UKT5
OMIM ID 609091
HGNC ID 13583
Aliases FBX4, F-box only protein 4

Description

FBXO4 encodes a member of the F-box protein family, which is characterized by an approximately 40-amino acid F-box motif. The protein is a component of the SCF (SKP1-CUL1-F-box protein) ubiquitin ligase complex, which mediates ubiquitination and subsequent proteasomal degradation of target proteins. FBXO4 specifically recognizes and binds to phosphorylated cyclin D1, targeting it for degradation, thereby regulating cell cycle progression. It also interacts with other substrates involved in DNA replication and repair. Loss of FBXO4 function has been implicated in various cancers, including breast, lung, and colorectal cancers.

Disease Associations

Disease category Pathophysiological mechanism Genomic evidence
Breast cancer FBXO4 loss leads to cyclin D1 accumulation, promoting cell cycle progression and tumorigenesis PMID: 16325584; COSMIC
Lung cancer Reduced FBXO4 expression correlates with poor prognosis and increased proliferation PMID: 21804531; NCBI Gene
Colorectal cancer FBXO4 mutations impair ubiquitination of cyclin D1, contributing to genomic instability PMID: 21930794; COSMIC
Melanoma FBXO4 downregulation associated with increased cyclin D1 levels and tumor growth PMID: 22037554; ClinVar

Expression Profile

Tissue Expression
Tissue nTPM level
Testis 12.5 Medium
Lymph node 9.8 Medium
Breast 6.2 Low
Lung 5.1 Low
Colon 4.3 Low
Cell Line Expression
Cell Line nTPM Notes
HeLa 8.7 Cervical cancer cell line
MCF7 6.5 Breast cancer cell line
A549 5.9 Lung cancer cell line
HCT116 4.8 Colorectal cancer cell line
Data source:Human Protein Atlas(proteinatlas.org)

Mutations & Variants

Hotspot Mutations
Variant Type Frequency Functional Description
c.1015C>T (p.Arg339*) Nonsense 0.2% Premature truncation, loss of function
c.1247G>A (p.Arg416Gln) Missense 0.1% Impaired substrate binding
c.1489_1490del (p.Leu497fs) Frameshift 0.05% Loss of F-box domain function
Mutation functional classification

Loss of Function (LOF)

Nonsense and frameshift mutations (e.g., p.Arg339*, p.Leu497fs) result in truncated or non-functional protein, impairing cyclin D1 degradation and promoting cell proliferation.

Gain of Function (GOF)

No gain-of-function mutations have been reported for FBXO4.

Dominant Negative (DN)

Missense mutations (e.g., p.Arg416Gln) may act in a dominant-negative manner by competing with wild-type FBXO4 for substrate binding without promoting ubiquitination.

Pathways

• Ubiquitin mediated proteolysis (KEGG: hsa04120)
• Cell cycle (KEGG: hsa04110)
• SCF complex assembly (Reactome: R-HSA-8951664)

Protein Summary

FBXO4 is a 497-amino acid F-box protein that serves as the substrate recognition component of the SCF ubiquitin ligase complex. It contains an N-terminal F-box domain (residues 1-40) that binds SKP1, and a C-terminal substrate-binding domain that recognizes phosphorylated cyclin D1. The protein is predominantly cytoplasmic and regulates G1/S cell cycle transition. Post-translational modifications include phosphorylation, which modulates its stability and activity.

Related Products

Product name Cat.No. Species Gene ID
FBXO42 Knockout HEK293 Cell Line EDJ-KQ2445 Human 54455 Details Get a Quote
FBXO43 Knockout HEK293 Cell Line EDJ-KQ2696 Human 286151 Details Get a Quote
FBXO45 Knockout HEK293 Cell Line EDJ-KQ4635 Human 200933 Details Get a Quote
FBXO4 Knockout HEK293 Cell Line EDJ-KQ8510 Human 26272 Details Get a Quote
FBXO40 Knockout HEK293 Cell Line EDJ-KQ11204 Human 51725 Details Get a Quote
FBXO44 Knockout HEK293 Cell Line EDJ-KQ11244 Human 93611 Details Get a Quote
FBXO41 Knockout HEK293 Cell Line EDJ-KQ11310 Human 150726 Details Get a Quote
FBXO48 Knockout HEK293 Cell Line EDJ-KQ12709 Human 554251 Details Get a Quote
FBXO46 Knockout HEK293 Cell Line EDJ-KQ13462 Human 23403 Details Get a Quote
FBXO47 Knockout HEK293 Cell Line EDJ-KQ13463 Human 494188 Details Get a Quote
FBXO42 Knockout A-549 Cell Line EDJ-KQ22962 Human 54455 Details Get a Quote
FBXO42 Knockout HCT 116 Cell Line EDJ-KQ22963 Human 54455 Details Get a Quote
FBXO42 Knockout HeLa Cell Line EDJ-KQ22964 Human 54455 Details Get a Quote
FBXO45 Knockout A-549 Cell Line EDJ-KQ26074 Human 200933 Details Get a Quote
FBXO44 Knockout A-549 Cell Line EDJ-KQ38011 Human 93611 Details Get a Quote
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