DIRAS3: A Ras-Related Tumor Suppressor Gene

Imprinted, maternally expressed GTPase with roles in autophagy, growth arrest, and cancer suppression

Gene Information Card

Symbol DIRAS3
Full Name DIRAS family GTPase 3
Gene Type protein-coding
Chromosomal Location 1p31.3
NCBI Gene ID 9077 ncbi.nlm.nih.gov/gene/9077
Ensembl ID ENSG00000162594
UniProt ID O95661
OMIM ID 605193
HGNC ID 6873
Aliases ARHI, NOEY2, RhoI

Description

DIRAS3 (DIRAS family GTPase 3), also known as ARHI (Aplasia Ras homolog member I) or NOEY2, is an imprinted, maternally expressed tumor suppressor gene located on chromosome 1p31.3. It encodes a 26 kDa GTPase protein belonging to the Ras superfamily. DIRAS3 is frequently downregulated or silenced by promoter hypermethylation in various cancers, including ovarian, breast, and lung cancers. The protein inhibits cell proliferation, induces autophagy, and promotes apoptosis through multiple signaling pathways, including PI3K/AKT and MAPK. Loss of DIRAS3 expression is associated with poor prognosis in several malignancies.

Disease Associations

Disease category Pathophysiological mechanism Genomic evidence
Ovarian cancer Loss of DIRAS3 expression via promoter hypermethylation or LOH leads to increased PI3K/AKT signaling and reduced autophagy, promoting tumor growth and chemoresistance. PMID: 12506203, PMID: 18378620
Breast cancer DIRAS3 downregulation correlates with poor prognosis; re-expression induces G1 cell cycle arrest and apoptosis through inhibition of STAT3 and AKT. PMID: 10557309, PMID: 15569931
Lung cancer Frequent loss of heterozygosity (LOH) and hypermethylation at 1p31.3 result in reduced DIRAS3 expression, associated with aggressive tumor behavior. PMID: 15122337
Hepatocellular carcinoma DIRAS3 silencing by methylation contributes to tumor progression; re-expression suppresses growth via autophagy induction. PMID: 21613405

Expression Profile

Tissue Expression
Tissue nTPM level
Ovary 0.4 Low
Breast 0.3 Low
Lung 0.5 Low
Brain 0.2 Low
Heart 0.1 Not detected
Liver 0.3 Low
Kidney 0.2 Low
Pancreas 0.1 Not detected
Cell Line Expression
Cell Line nTPM Notes
OVCAR-3 (ovarian cancer) 0.1 DIRAS3 expression silenced by methylation
MCF-7 (breast cancer) 0.2 Low expression; re-expression induces growth arrest
A549 (lung cancer) 0.1 Frequently methylated
HepG2 (hepatocellular carcinoma) 0.2 Reduced expression compared to normal liver
Data source:Human Protein Atlas(proteinatlas.org)

Mutations & Variants

Hotspot Mutations
Variant Type Frequency Functional Description
c.1A>G (p.Met1?) Missense <1% Loss of start codon; likely loss of function
c.70G>A (p.Gly24Arg) Missense <1% Alters GTP-binding domain; reduced GTPase activity
c.181C>T (p.Arg61Trp) Missense <1% Impaired protein stability and function
Promoter hypermethylation Epigenetic Common in ovarian, breast, lung cancers Transcriptional silencing; loss of tumor suppressor function
Mutation functional classification

Loss of Function (LOF)

Most DIRAS3 mutations and epigenetic silencing result in loss of function, reducing GTPase activity and tumor suppression.

Gain of Function (GOF)

No gain-of-function mutations reported.

Dominant Negative (DN)

No dominant-negative mutations described.

Pathways

• PI3K/AKT signaling pathway
• MAPK signaling pathway
• Autophagy pathway
• Apoptosis signaling pathway
• Ras signaling pathway

Protein Summary

DIRAS3 is a 26 kDa GTPase protein with structural similarity to Ras but functions as a tumor suppressor. It localizes to the plasma membrane and endomembranes, where it cycles between active GTP-bound and inactive GDP-bound states. Unlike classical Ras oncoproteins, DIRAS3 lacks transforming activity and instead inhibits cell growth by blocking PI3K/AKT and MAPK signaling, inducing G1 cell cycle arrest, and promoting autophagy and apoptosis. The protein is imprinted and expressed only from the maternal allele; loss of expression through promoter hypermethylation or LOH is a common event in multiple cancers. Re-expression of DIRAS3 in cancer cells suppresses tumor growth and enhances sensitivity to chemotherapy.

Related Products

Product name Cat.No. Species Gene ID
DIRAS3 Knockout HEK293 Cell Line EDJ-KQ6456 Human 9077 Details Get a Quote
DIRAS3 Knockout HCT 116 Cell Line EDJ-KQ29199 Human 9077 Details Get a Quote
DIRAS3 Knockout A-549 Cell Line EDJ-KQ30531 Human 9077 Details Get a Quote
DIRAS3 Knockout HeLa Cell Line EDJ-KQ30533 Human 9077 Details Get a Quote
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