CBS (Cystathionine Beta-Synthase) Gene
Key enzyme in homocysteine metabolism; mutations cause homocystinuria
Gene Information Card
| Symbol | CBS |
|---|---|
| Full Name | Cystathionine Beta-Synthase |
| Gene Type | Protein coding |
| Chromosomal Location | 21q22.3 |
| NCBI Gene ID | 875 ncbi.nlm.nih.gov/gene/875 |
| Ensembl ID | ENSG00000160200 |
| UniProt ID | P35520 |
| OMIM ID | 236200 |
| HGNC ID | 1550 |
| Aliases | HIP4, CBSL, MGC138366, MGC138368 |
Description
The CBS gene encodes cystathionine beta-synthase, a heme-containing enzyme that catalyzes the condensation of homocysteine and serine to form cystathionine, the first step in the transsulfuration pathway. This enzyme is critical for homocysteine metabolism and the biosynthesis of cysteine. Mutations in CBS cause classic homocystinuria (OMIM #236200), an autosomal recessive disorder characterized by elevated homocysteine levels, thromboembolism, ectopia lentis, intellectual disability, and skeletal abnormalities. The gene is located on chromosome 21q22.3 and is expressed in multiple tissues, with highest levels in liver and kidney.
Disease Associations
| Disease category | Pathophysiological mechanism | Genomic evidence |
|---|---|---|
| Homocystinuria due to CBS deficiency | Loss-of-function mutations impair homocysteine clearance, leading to toxic accumulation of homocysteine and methionine | OMIM #236200; ClinVar; multiple case studies |
| Thromboembolism (associated with hyperhomocysteinemia) | Elevated homocysteine promotes endothelial dysfunction and thrombosis | Epidemiological studies; ClinVar |
| Ectopia lentis | Homocysteine disrupts collagen cross-linking in the lens zonules | OMIM; clinical reports |
| Intellectual disability | Neurotoxic effects of homocysteine on developing brain | OMIM; clinical studies |
Expression Profile
Tissue Expression
| Tissue | nTPM | level |
|---|---|---|
| Liver | 20.1 | High |
| Kidney | 15.3 | High |
| Pancreas | 8.7 | Medium |
| Brain | 6.2 | Medium |
| Heart | 4.5 | Low |
Cell Line Expression
| Cell Line | nTPM | Notes |
|---|---|---|
| HepG2 (liver) | 22.4 | High expression |
| HEK293 (embryonic kidney) | 18.1 | High expression |
| SH-SY5Y (neuroblastoma) | 7.3 | Medium expression |
| HeLa (cervical) | 3.8 | Low expression |
Data source:Human Protein Atlas(proteinatlas.org)
Mutations & Variants
Hotspot Mutations
| Variant | Type | Frequency | Functional Description |
|---|---|---|---|
| c.833T>C (p.Ile278Thr) | Missense | Common in homocystinuria | Loss of function; reduced enzyme activity |
| c.919G>A (p.Gly307Ser) | Missense | Frequent in pyridoxine-responsive homocystinuria | Partial loss of function; responsive to vitamin B6 |
| c.341C>T (p.Pro114Leu) | Missense | Rare | Severe loss of function |
| c.1224_1225insC (p.Leu409Profs*13) | Frameshift | Rare | Null allele; complete loss of function |
Mutation functional classification
Loss of Function (LOF)
Most CBS mutations are loss-of-function, reducing or abolishing enzyme activity, leading to homocystinuria.
Gain of Function (GOF)
No gain-of-function mutations are reported for CBS.
Dominant Negative (DN)
No dominant-negative mutations are described; CBS deficiency is recessive.
View complete mutation data:
Gene Ontology (GO)
Pathways
• Cysteine and methionine metabolism (KEGG:00270)
• Transsulfuration pathway (Reactome:R-HSA-1614558)
Protein Summary
Cystathionine beta-synthase (UniProt P35520) is a 551-amino acid homotetrameric enzyme that uses pyridoxal phosphate (PLP) and heme as cofactors. It catalyzes the condensation of homocysteine and serine to form cystathionine. The protein is primarily expressed in liver and kidney, with lower levels in brain and other tissues. Mutations that reduce CBS activity cause homocystinuria, a metabolic disorder treatable with vitamin B6 in some cases.
Related Services
Related Products
| Product name | Cat.No. | Species | Gene ID | |
|---|---|---|---|---|
| Cbs Knockout HT22 Cell Line | EDJ-KZ132 | Mouse | 12411 | Details Get a Quote |
| CBS Knockout HEK293 Cell Line | EDC90157 | Human | 875 | Details Get a Quote |
| CBS Knockout HeLa Cell Line | EDJ-KQ52798 | Human | 875 | Details Get a Quote |
| CBS Knockout A-549 Cell Line | EDJ-KQ61269 | Human | 875 | Details Get a Quote |
| CBS Knockout HCT 116 Cell Line | EDJ-KQ69764 | Human | 875 | Details Get a Quote |
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