ASIC3 Gene: Acid-Sensing Ion Channel 3 in Pain and Inflammation
Explore the ASIC3 gene, its protein product, tissue expression, mutations, and associated diseases with curated references from NCBI, Ensembl, UniProt, OMIM, HGNC, COSMIC, and ClinVar.
Gene Information Card
| Symbol | ASIC3 |
|---|---|
| Full Name | Acid Sensing Ion Channel Subunit 3 |
| Gene Type | protein coding |
| Chromosomal Location | 7q36.1 |
| NCBI Gene ID | 9311 ncbi.nlm.nih.gov/gene/9311 |
| Ensembl ID | ENSG00000164818 |
| UniProt ID | Q9UHC3 |
| OMIM ID | 611741 |
| HGNC ID | 102 |
| Aliases | ACCN3, DRASIC, TNaC1 |
Description
The ASIC3 gene encodes the acid-sensing ion channel subunit 3, a member of the degenerin/epithelial sodium channel (DEG/ENaC) superfamily. This channel is activated by extracellular protons (low pH) and plays a critical role in pain perception, particularly in response to tissue acidosis associated with inflammation, ischemia, and injury. ASIC3 is predominantly expressed in sensory neurons of the peripheral nervous system and contributes to nociception, mechanosensation, and modulation of inflammatory pain.
Disease Associations
| Disease category | Pathophysiological mechanism | Genomic evidence |
|---|---|---|
| Pain disorders | ASIC3 mediates acid-induced pain and hyperalgesia; altered expression or function may contribute to chronic pain conditions. | PubMed: 12060708; 15194846 |
| Inflammatory bowel disease | ASIC3 expression is upregulated in inflamed colonic tissue; may contribute to visceral hypersensitivity. | PubMed: 21439624 |
| Osteoarthritis | ASIC3 is expressed in chondrocytes and synovium; acid sensing may contribute to joint pain and degeneration. | PubMed: 22113772 |
| Migraine | ASIC3 in trigeminal neurons may be involved in headache pathophysiology. | PubMed: 23220419 |
Expression Profile
Tissue Expression
| Tissue | nTPM | level |
|---|---|---|
| Sensory ganglia (dorsal root ganglia) | Not available | High expression in DRG neurons |
| Testis | Not available | Moderate expression |
| Lung | Not available | Low expression |
| Heart | Not available | Low expression |
| Brain | Not available | Low expression in specific regions |
Cell Line Expression
| Cell Line | nTPM | Notes |
|---|---|---|
| SH-SY5Y (neuroblastoma) | Not available | Endogenous expression; used in functional studies |
| PC-12 (pheochromocytoma) | Not available | Expression reported; acid-induced currents |
| HEK293 (transfected) | Not available | Overexpression used for electrophysiology |
Data source:Human Protein Atlas(proteinatlas.org)
Mutations & Variants
Hotspot Mutations
| Variant | Type | Frequency | Functional Description |
|---|---|---|---|
| c.104C>T (p.Pro35Leu) | Missense | Rare | Potential effect on channel function; not well characterized |
| c.112G>A (p.Gly38Arg) | Missense | Rare | Reported in pain disorders; functional impact unknown |
| c.145C>T (p.Arg49Cys) | Missense | Rare | May alter pH sensitivity; not confirmed |
Mutation functional classification
Loss of Function (LOF)
Loss-of-function mutations in ASIC3 are not well documented; knockout mice show reduced acid-induced pain, but human variants are rare.
Gain of Function (GOF)
Gain-of-function mutations may enhance acid sensitivity, potentially increasing pain sensitivity; however, no confirmed human gain-of-function variants have been reported.
Dominant Negative (DN)
Dominant-negative effects have not been described for ASIC3 mutations; ASIC3 forms functional channels as homo- or hetero-multimers, and mutant subunits could potentially interfere, but evidence is lacking.
View complete mutation data:
Gene Ontology (GO)
| • ion channel activity | • sodium channel activity |
| • extracellular ligand-gated ion channel activity | • proton binding |
| • plasma membrane | • integral component of plasma membrane |
| • response to acidic pH | • detection of pH |
| • sensory perception of pain | • inflammatory response |
Pathways
• Acid-sensing ion channel signaling
• Pain sensation and modulation
• Inflammatory mediator regulation of TRP channels (cross-talk)
• Nociception pathway
Protein Summary
The ASIC3 protein is a 531-amino acid subunit that assembles into homo- or heterotrimeric channels. It is activated by a drop in extracellular pH, leading to sodium influx and neuronal depolarization. ASIC3 is highly expressed in sensory neurons, where it contributes to the detection of tissue acidosis and pain. It also plays roles in mechanosensation and in the modulation of inflammatory pain. The protein has two transmembrane domains, a large extracellular loop, and intracellular N- and C-termini. Post-translational modifications and interactions with other proteins (e.g., PICK1, STOM) regulate its trafficking and function.
Related Services
Related Products
| Product name | Cat.No. | Species | Gene ID | |
|---|---|---|---|---|
| ASIC3 Knockout HEK293 Cell Line | EDJ-KQ6538 | Human | 9311 | Details Get a Quote |
| ASIC3 Knockout A-549 Cell Line | EDJ-KQ30707 | Human | 9311 | Details Get a Quote |
| ASIC3 Knockout HCT 116 Cell Line | EDJ-KQ30708 | Human | 9311 | Details Get a Quote |
| ASIC3 Knockout HeLa Cell Line | EDJ-KQ30709 | Human | 9311 | Details Get a Quote |
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