ASIC3 Gene: Acid-Sensing Ion Channel 3 in Pain and Inflammation

Explore the ASIC3 gene, its protein product, tissue expression, mutations, and associated diseases with curated references from NCBI, Ensembl, UniProt, OMIM, HGNC, COSMIC, and ClinVar.

Gene Information Card

Symbol ASIC3
Full Name Acid Sensing Ion Channel Subunit 3
Gene Type protein coding
Chromosomal Location 7q36.1
NCBI Gene ID 9311 ncbi.nlm.nih.gov/gene/9311
Ensembl ID ENSG00000164818
UniProt ID Q9UHC3
OMIM ID 611741
HGNC ID 102
Aliases ACCN3, DRASIC, TNaC1

Description

The ASIC3 gene encodes the acid-sensing ion channel subunit 3, a member of the degenerin/epithelial sodium channel (DEG/ENaC) superfamily. This channel is activated by extracellular protons (low pH) and plays a critical role in pain perception, particularly in response to tissue acidosis associated with inflammation, ischemia, and injury. ASIC3 is predominantly expressed in sensory neurons of the peripheral nervous system and contributes to nociception, mechanosensation, and modulation of inflammatory pain.

Disease Associations

Disease category Pathophysiological mechanism Genomic evidence
Pain disorders ASIC3 mediates acid-induced pain and hyperalgesia; altered expression or function may contribute to chronic pain conditions. PubMed: 12060708; 15194846
Inflammatory bowel disease ASIC3 expression is upregulated in inflamed colonic tissue; may contribute to visceral hypersensitivity. PubMed: 21439624
Osteoarthritis ASIC3 is expressed in chondrocytes and synovium; acid sensing may contribute to joint pain and degeneration. PubMed: 22113772
Migraine ASIC3 in trigeminal neurons may be involved in headache pathophysiology. PubMed: 23220419

Expression Profile

Tissue Expression
Tissue nTPM level
Sensory ganglia (dorsal root ganglia) Not available High expression in DRG neurons
Testis Not available Moderate expression
Lung Not available Low expression
Heart Not available Low expression
Brain Not available Low expression in specific regions
Cell Line Expression
Cell Line nTPM Notes
SH-SY5Y (neuroblastoma) Not available Endogenous expression; used in functional studies
PC-12 (pheochromocytoma) Not available Expression reported; acid-induced currents
HEK293 (transfected) Not available Overexpression used for electrophysiology
Data source:Human Protein Atlas(proteinatlas.org)

Mutations & Variants

Hotspot Mutations
Variant Type Frequency Functional Description
c.104C>T (p.Pro35Leu) Missense Rare Potential effect on channel function; not well characterized
c.112G>A (p.Gly38Arg) Missense Rare Reported in pain disorders; functional impact unknown
c.145C>T (p.Arg49Cys) Missense Rare May alter pH sensitivity; not confirmed
Mutation functional classification

Loss of Function (LOF)

Loss-of-function mutations in ASIC3 are not well documented; knockout mice show reduced acid-induced pain, but human variants are rare.

Gain of Function (GOF)

Gain-of-function mutations may enhance acid sensitivity, potentially increasing pain sensitivity; however, no confirmed human gain-of-function variants have been reported.

Dominant Negative (DN)

Dominant-negative effects have not been described for ASIC3 mutations; ASIC3 forms functional channels as homo- or hetero-multimers, and mutant subunits could potentially interfere, but evidence is lacking.

Gene Ontology (GO)

• ion channel activity • sodium channel activity
• extracellular ligand-gated ion channel activity • proton binding
• plasma membrane • integral component of plasma membrane
• response to acidic pH • detection of pH
• sensory perception of pain • inflammatory response

Pathways

Acid-sensing ion channel signaling
Pain sensation and modulation
Inflammatory mediator regulation of TRP channels (cross-talk)
Nociception pathway

Protein Summary

The ASIC3 protein is a 531-amino acid subunit that assembles into homo- or heterotrimeric channels. It is activated by a drop in extracellular pH, leading to sodium influx and neuronal depolarization. ASIC3 is highly expressed in sensory neurons, where it contributes to the detection of tissue acidosis and pain. It also plays roles in mechanosensation and in the modulation of inflammatory pain. The protein has two transmembrane domains, a large extracellular loop, and intracellular N- and C-termini. Post-translational modifications and interactions with other proteins (e.g., PICK1, STOM) regulate its trafficking and function.

Related Products

Product name Cat.No. Species Gene ID
ASIC3 Knockout HEK293 Cell Line EDJ-KQ6538 Human 9311 Details Get a Quote
ASIC3 Knockout A-549 Cell Line EDJ-KQ30707 Human 9311 Details Get a Quote
ASIC3 Knockout HCT 116 Cell Line EDJ-KQ30708 Human 9311 Details Get a Quote
ASIC3 Knockout HeLa Cell Line EDJ-KQ30709 Human 9311 Details Get a Quote
Displaying Records 1 To 4 Of 4 Records
Contact Us
*
*
*
*
How did you hear about us: