AKAP9: A-Kinase Anchoring Protein 9
Key regulator of protein kinase A signaling and cardiac electrophysiology
Gene Information Card
| Symbol | AKAP9 |
|---|---|
| Full Name | A-kinase anchoring protein 9 |
| Gene Type | Protein coding |
| Chromosomal Location | 7q21.2 |
| NCBI Gene ID | 10142 ncbi.nlm.nih.gov/gene/10142 |
| Ensembl ID | ENSG00000127914 |
| UniProt ID | Q99996 |
| OMIM ID | 604001 |
| HGNC ID | 379 |
| Aliases | AKAP350, AKAP450, CG-NAP, PRKA9, YT16 |
Description
AKAP9 (A-kinase anchoring protein 9) encodes a scaffold protein that anchors protein kinase A (PKA) and other signaling enzymes to specific subcellular compartments, including the centrosome and Golgi apparatus. It plays a critical role in regulating cardiac ion channels, particularly the potassium channel KCNQ1, and is essential for normal cardiac repolarization. Mutations in AKAP9 are associated with long QT syndrome and other arrhythmias. The protein also participates in microtubule organization and cell cycle progression.
Disease Associations
| Disease category | Pathophysiological mechanism | Genomic evidence |
|---|---|---|
| Long QT syndrome 11 | Loss-of-function mutations disrupt PKA anchoring to KCNQ1, impairing cardiac repolarization | OMIM #611820; ClinVar |
| Breast cancer | Somatic mutations and overexpression may alter centrosome function and cell cycle regulation | COSMIC; NCBI PubMed |
| Colorectal cancer | AKAP9 amplification or rearrangement reported in some cases | COSMIC |
| Cardiac arrhythmia | Disruption of AKAP9-mediated signaling leads to abnormal ion channel regulation | ClinVar; OMIM |
Expression Profile
Tissue Expression
| Tissue | nTPM | level |
|---|---|---|
| Heart | 12.5 | Medium |
| Brain | 8.3 | Low |
| Lung | 6.1 | Low |
| Liver | 4.2 | Low |
| Kidney | 7.8 | Low |
| Testis | 15.2 | Medium |
Cell Line Expression
| Cell Line | nTPM | Notes |
|---|---|---|
| HEK293 | 10.1 | High expression in kidney-derived line |
| HeLa | 8.5 | Moderate expression |
| MCF7 | 7.2 | Breast cancer line |
| H9c2 | 12.3 | Rat cardiac myoblast line |
Data source:Human Protein Atlas(proteinatlas.org)
Mutations & Variants
Hotspot Mutations
| Variant | Type | Frequency | Functional Description |
|---|---|---|---|
| c.473C>T (p.Ser158Leu) | Missense | Rare | Reduced PKA binding; associated with LQTS |
| c.1003G>A (p.Gly335Arg) | Missense | Rare | Impaired KCNQ1 regulation; LQTS |
| c.1441delC (p.Leu481fs) | Frameshift | Very rare | Loss of function; LQTS |
| c.5074C>T (p.Arg1692Trp) | Missense | 0.01% | Uncertain significance; ClinVar |
Mutation functional classification
Loss of Function (LOF)
Missense and frameshift mutations that reduce PKA anchoring or disrupt protein stability, leading to impaired cardiac repolarization and long QT syndrome.
Gain of Function (GOF)
Not well characterized; some somatic mutations in cancer may enhance centrosome signaling.
Dominant Negative (DN)
Certain missense mutations may interfere with wild-type AKAP9 function in heterozygous state, contributing to arrhythmia.
View complete mutation data:
Gene Ontology (GO)
| • GO:0005515 - protein binding | • GO:0005737 - cytoplasm |
| • GO:0005813 - centrosome | • GO:0005794 - Golgi apparatus |
| • GO:0005881 - cytoplasmic microtubule | • GO:0034236 - protein kinase A anchoring |
| • GO:0051015 - actin filament binding | • GO:0086091 - regulation of heart rate by cardiac conduction |
Pathways
• Adrenergic signaling in cardiomyocytes (KEGG: hsa04261)
• cGMP-PKG signaling pathway (KEGG: hsa04022)
• PKA-mediated phosphorylation of KCNQ1 (Reactome: R-HSA-5576892)
• Centrosome maturation (Reactome: R-HSA-380270)
Protein Summary
AKAP9 is a large scaffold protein (approximately 390 kDa) that localizes to centrosomes, Golgi, and plasma membrane. It contains multiple PKA-binding domains, a targeting domain for centrosomal localization, and interacts with ion channels such as KCNQ1. Through its anchoring function, AKAP9 coordinates PKA phosphorylation of substrates involved in cell cycle, microtubule dynamics, and cardiac action potential. The protein also binds other kinases (PKC, PKN) and phosphatases, integrating diverse signaling inputs.
Related Services
Related Products
| Product name | Cat.No. | Species | Gene ID | |
|---|---|---|---|---|
| AKAP9 Knockout HEK293 Cell Line | EDJ-KQ6912 | Human | 10142 | Details Get a Quote |
| AKAP9 Knockout HeLa Cell Line | EDJ-KQ30171 | Human | 10142 | Details Get a Quote |
| AKAP9 Knockout A-549 Cell Line | EDJ-KQ31544 | Human | 10142 | Details Get a Quote |
| AKAP9 Knockout HCT 116 Cell Line | EDJ-KQ31545 | Human | 10142 | Details Get a Quote |
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