Autoimmune Lymphoproliferative Syndrome (ALPS) Cell Models for Research

Disease Burden and Research Significance

Epidemiology and Clinical Impact

Autoimmune Lymphoproliferative Syndrome (ALPS) is a rare inherited disorder of immune dysregulation, with an estimated prevalence of 1 in 1,000,000 individuals. It is characterized by chronic nonmalignant lymphoproliferation, autoimmune cytopenias, and an increased risk of lymphoma. The disease typically manifests in childhood, with a median age of onset of 2 years. The 5-year survival is high, but morbidity from autoimmune complications and lymphoma is significant. According to the National Cancer Institute (NCI), the risk of Hodgkin and non-Hodgkin lymphoma is increased 14-fold and 10-fold, respectively, compared to the general population.

Value as a Research Model

ALPS is an ideal model for studying apoptosis and immune tolerance. The primary defect is in the Fas apoptotic pathway, leading to defective lymphocyte apoptosis. Research models include cell lines with mutations in FAS, FASLG, and CASP10. Public datasets, such as those from the International ALPS Registry, provide clinical and genetic data. Open questions include the molecular basis of incomplete penetrance and the development of targeted therapies to correct the apoptotic defect.

Core Molecular Pathogenesis

Major Pathogenic Pathways

The core defect in ALPS is impaired Fas-mediated apoptosis. The pathway involves:

1. Fas ligand (FasL) binds to Fas receptor (CD95) on lymphocytes.

2. Fas trimerizes and recruits FADD (Fas-associated death domain) and procaspase-8.

3. Formation of the death-inducing signaling complex (DISC) activates caspase-8.

4. Caspase-8 activates downstream caspases (e.g., caspase-3), leading to apoptosis.

Mutations in FAS, FASLG, or CASP10 disrupt this pathway, preventing lymphocyte apoptosis and causing accumulation of autoreactive lymphocytes.

High-Frequency Genetic Alterations
GeneFrequency (%)Mutation TypeFunctional Effect
FAS (TNFRSF6)60-70Heterozygous dominant-negative mutationsImpaired Fas signaling, defective apoptosis
FASLG5-10Homozygous or compound heterozygous mutationsReduced Fas ligand function
CASP102-5Heterozygous mutationsImpaired caspase-10 activity, defective apoptosis

Data from NCBI Gene and ClinVar.

Deregulated Signaling Networks

Beyond the Fas pathway, ALPS involves deregulation of other signaling networks:

  • • NF-κB pathway: Chronic activation due to defective apoptosis leads to increased inflammatory cytokine production.
  • • PI3K/AKT pathway: Enhanced survival signaling may compensate for defective apoptosis.
  • • B-cell receptor signaling: Altered tolerance checkpoints contribute to autoantibody production.

Key nodes include FAS, FADD, CASP8, CASP10, and BID.

Experimental Model Systems

Cell Lines and Organoids
Cell LineOriginKey Mutations
JurkatT-cell leukemiaFAS mutations (e.g., FAS deficient)
H9T-cell lymphomaFAS mutations
CEMT-cell lymphoblastic leukemiaFAS mutations

Organoids derived from ALPS patient lymphocytes are emerging as more physiologically relevant models, preserving the immune microenvironment.

Animal Models (PDX, GEMM, Induced)
  • • MRL/lpr mice: Spontaneous FAS mutation, develop lymphoproliferation and autoimmune disease.
  • • C57BL/6-lpr mice: Similar phenotype.
  • • FAS knockout mice: Complete loss of FAS, severe lymphoproliferation.
  • • Patient-derived xenograft (PDX) models: Engraftment of ALPS lymphocytes into immunodeficient mice, but limited due to the nonmalignant nature.
Gene-Edited Cell Models

CRISPR-based gene editing enables the creation of isogenic cell lines with precise mutations in FAS, FASLG, or CASP10. These models are essential for studying the functional consequences of specific mutations and for drug screening. For example, a FAS knockout Jurkat cell line can be generated to model complete loss of function, while a knock-in of a dominant-negative FAS mutation can mimic patient-specific defects. Commercially available, sequence-verified models accelerate research by providing consistent and validated tools.

Related Disease

Disease name Disease type

Related Products

Product name Cat.No. Species Gene ID
CD19 Overexpression K-562 Stable Cell Line EDC01465 Human 930 Details Get a Quote
IFNg Overexpression HEK293 Stable Cell Line EDJ-GQ88 Human 3458 Details Get a Quote
NLRP3 Knockout MARC145 Cell Line EDJ-KQ78172 African green monkey 114548 Details Get a Quote
Nlrp3 Knockout BV-2 Cell Line EDC90056 Mouse 216799 Details Get a Quote
DAG1 Knockout HeLa Cell Line EDJ-KQ29 Human 1605 Details Get a Quote
Ripk1 Knockout NCTC clone 929 Cell Line EDJ-KQ50 Mouse 19766 Details Get a Quote
TNFRSF1A Knockout HEK293 Cell Line EDC90705 Human 7132 Details Get a Quote
IL12RB1 Knockout HEK293 Cell Line EDJ-KQ131 Human 3594 Details Get a Quote
CARD11 Knockout HEK293 Cell Line EDJ-KQ138 Human 84433 Details Get a Quote
IL1B Knockout HEK293 Cell Line EDJ-KQ140 Human 3553 Details Get a Quote
PIK3R1 Knockout HEK293T Cell Line EDJ-KQ159 Human 5295 Details Get a Quote
CASP9 Knockout HEK293 Cell Line EDJ-KQ183 Human 842 Details Get a Quote
RASGRP1 Knockout HEK293 Cell Line EDJ-KQ185 Human 10125 Details Get a Quote
STAT1 Knockout HEK293 Cell Line EDJ-KQ188 Human 6772 Details Get a Quote
IKBKG Knockout HEK293T Cell Line EDJ-KQ207 Human 8517 Details Get a Quote
Displaying Records 1 To 15 Of 792 Records

Applications of Gene-Edited Cells

Functional Genomics

Knockout and knock-in lines are used to validate the role of genes in apoptosis. For instance, a FAS knockout cell line can be used to confirm the necessity of FAS in FasL-induced apoptosis. Similarly, introducing a specific CASP10 mutation into a wild-type cell line can assess its impact on apoptotic signaling.

Drug Screening and Resistance

Isogenic pairs (e.g., wild-type vs. FAS knockout) are used to screen for compounds that restore apoptosis in defective cells. This approach can identify drugs that bypass the Fas pathway or enhance alternative death signaling. Resistance mechanisms can be studied by exposing cells to increasing concentrations of apoptosis-inducing agents and selecting for resistant clones.

Biomarker Discovery

CRISPR-based synthetic lethality screens can identify genes that, when inhibited, selectively kill ALPS cells with defective apoptosis. This can reveal novel therapeutic targets and biomarkers for patient stratification.

Public Data Resources

DatabaseURLDescription
TCGAhttps://portal.gdc.cancer.govCancer genomics data, including lymphoma subtypes
cBioPortalhttps://www.cbioportal.orgVisualization and analysis of cancer genomics
DepMaphttps://depmap.orgCRISPR screens and dependency data
GEOhttps://www.ncbi.nlm.nih.gov/geoGene expression datasets
ClinVarhttps://www.ncbi.nlm.nih.gov/clinvarClinical variant database
UniProthttps://www.uniprot.orgProtein sequence and function

Frequently Asked Research Questions

Heterozygous dominant-negative mutations in the FAS gene account for 60-70% of cases.
They allow precise ablation of genes like FAS to study the impact on apoptosis and immune function.
Yes, commercially available isogenic lines with specific FAS or CASP10 mutations can be used for drug screening.
The Fas pathway is critical for apoptosis of activated lymphocytes; defects lead to lymphoproliferation and autoimmunity.
Yes, they are essential for high-throughput screening of compounds that restore apoptosis.

Key References and Database URLs

WHO https://www.who.int
NCI https://www.cancer.gov
NCBI Gene https://www.ncbi.nlm.nih.gov/gene
TCGA https://portal.gdc.cancer.gov
COSMIC https://cancer.sanger.ac.uk/cosmic
ClinVar https://www.ncbi.nlm.nih.gov/clinvar
UniProt https://www.uniprot.org
DepMap https://depmap.org
Contact Us
*
*
*
*
How did you hear about us: