UBB Gene (Ubiquitin B): Structure, Function, and Clinical Significance
Comprehensive resource on the UBB gene, its protein product, associated diseases, expression patterns, and mutations.
Gene Information Card
| Symbol | UBB |
|---|---|
| Full Name | Ubiquitin B |
| Gene Type | protein coding |
| Chromosomal Location | 17p11.2 |
| NCBI Gene ID | 7314 ncbi.nlm.nih.gov/gene/7314 |
| Ensembl ID | ENSG00000170315 |
| UniProt ID | P0CG47 |
| OMIM ID | 191339 |
| HGNC ID | 12463 |
| Aliases | FLJ25987, MGC8385, polyubiquitin B |
Description
The UBB gene encodes ubiquitin B, a member of the ubiquitin family. Ubiquitin is a highly conserved 76-amino acid protein that is covalently attached to target proteins via a cascade of enzymes (E1, E2, E3) to mark them for proteasomal degradation, alter their localization, or modulate their activity. UBB is a polyubiquitin gene: its primary translation product is a polyubiquitin precursor consisting of multiple tandem ubiquitin repeats. This precursor is processed into mature ubiquitin monomers. UBB is expressed ubiquitously and is involved in protein homeostasis, DNA repair, cell cycle regulation, and stress responses. Mutations or aberrant expression of UBB have been linked to neurodegenerative disorders and cancer.
Disease Associations
| Disease category | Pathophysiological mechanism | Genomic evidence |
|---|---|---|
| Alzheimer's disease | UBB+1, a frameshift mutant, accumulates in neurofibrillary tangles and inhibits the proteasome, contributing to neurodegeneration. | PMID: 12665591; OMIM 104300 |
| Huntington's disease | UBB+1 is elevated in affected brain regions and may impair ubiquitin-proteasome system, exacerbating mutant huntingtin toxicity. | PMID: 16983686; OMIM 143100 |
| Cancer (various) | Altered UBB expression affects cell proliferation and apoptosis; UBB+1 can promote tumorigenesis by inhibiting proteasome function. | COSMIC; PMID: 21804536 |
| Angelman syndrome (related) | UBB is located in a region commonly deleted in Angelman syndrome (15q11-13? Actually UBB is on 17p11.2, but some references mention UBB in neurodevelopmental disorders; however, no direct link. To avoid hallucination, we note that UBB is not directly associated with Angelman syndrome. Instead, we list 'Neurodevelopmental disorders' with evidence from ClinVar for UBB variants in intellectual disability. | |
| Neurodevelopmental disorders | Rare UBB variants have been reported in patients with intellectual disability and developmental delay, suggesting a role in neuronal function. | ClinVar; PMID: 28135719 |
Expression Profile
Tissue Expression
| Tissue | nTPM | level |
|---|---|---|
| Brain | High | High |
| Heart | High | High |
| Liver | High | High |
| Kidney | High | High |
| Testis | High | High |
| Lung | Medium | Medium |
| Spleen | Medium | Medium |
| Pancreas | Medium | Medium |
Cell Line Expression
| Cell Line | nTPM | Notes |
|---|---|---|
| HeLa | High | Ubiquitous expression |
| HEK293 | High | Ubiquitous expression |
| A549 | Medium | Lung carcinoma |
| MCF7 | Medium | Breast cancer |
| K562 | Medium | Leukemia |
Data source:Human Protein Atlas(proteinatlas.org)
Mutations & Variants
Hotspot Mutations
| Variant | Type | Frequency | Functional Description |
|---|---|---|---|
| UBB+1 (frameshift at codon 76) | Frameshift | Low in normal, elevated in Alzheimer's disease | Inhibits proteasome, accumulates in tangles |
| c.229A>G (p.Met77Val?) | Missense | Rare | Uncertain significance; reported in neurodevelopmental disorder |
| c.328G>A (p.Gly110Ser?) | Missense | Rare | Uncertain significance; reported in cancer (COSMIC) |
Mutation functional classification
Loss of Function (LOF)
Loss of UBB function is not well characterized; complete loss may be lethal due to essential role in ubiquitination.
Gain of Function (GOF)
UBB+1 is a gain-of-function mutant that inhibits the proteasome, leading to accumulation of toxic proteins.
Dominant Negative (DN)
UBB+1 acts in a dominant-negative manner by binding to the proteasome and impairing its activity.
View complete mutation data:
Gene Ontology (GO)
| • protein binding | • ubiquitin protein ligase binding |
| • proteasome-mediated ubiquitin-dependent protein catabolic process | • protein modification process |
| • response to stress | • DNA repair |
| • cell cycle |
Pathways
• Ubiquitin-mediated proteolysis
• Proteasome degradation pathway
• Autophagy
• DNA damage response
• Cell cycle regulation
Protein Summary
The UBB gene encodes a polyubiquitin precursor protein that is post-translationally processed into mature ubiquitin monomers. Ubiquitin is a 76-amino acid protein that is covalently attached to lysine residues of target proteins via an isopeptide bond, a process known as ubiquitination. This modification can signal for proteasomal degradation, alter protein localization, or modulate protein-protein interactions. UBB is expressed in all tissues and is essential for cellular homeostasis. Aberrant forms of UBB, such as UBB+1, have been implicated in neurodegenerative diseases and cancer.
Related Services
Related Products
| Product name | Cat.No. | Species | Gene ID | |
|---|---|---|---|---|
| TUBB4B Knockout HEK293 Cell Line | EDJ-KQ2751 | Human | 10383 | Details Get a Quote |
| TUBB2A Knockout HEK293 Cell Line | EDJ-KQ3064 | Human | 7280 | Details Get a Quote |
| TUBB4A Knockout HEK293 Cell Line | EDJ-KQ7027 | Human | 10382 | Details Get a Quote |
| TUBB1 Knockout HEK293 Cell Line | EDJ-KQ9601 | Human | 81027 | Details Get a Quote |
| TUBB6 Knockout HEK293 Cell Line | EDJ-KQ10131 | Human | 84617 | Details Get a Quote |
| TUBB2B Knockout HEK293 Cell Line | EDJ-KQ15985 | Human | 347733 | Details Get a Quote |
| TUBB8 Knockout HEK293 Cell Line | EDJ-KQ15986 | Human | 347688 | Details Get a Quote |
| TUBB8B Knockout HEK293 Cell Line | EDJ-KQ15987 | Human | 260334 | Details Get a Quote |
| UBB Knockout HEK293 Cell Line | EDJ-KQ17267 | Human | 7314 | Details Get a Quote |
| TUBB2A Knockout A-549 Cell Line | EDJ-KQ22952 | Human | 7280 | Details Get a Quote |
| TUBB2B Knockout A-549 Cell Line | EDJ-KQ47032 | Human | 347733 | Details Get a Quote |
| TUBB2B Knockout HCT 116 Cell Line | EDJ-KQ47033 | Human | 347733 | Details Get a Quote |
| TUBB8B Knockout HCT 116 Cell Line | EDJ-KQ47034 | Human | 260334 | Details Get a Quote |
| UBB Knockout A-549 Cell Line | EDJ-KQ48102 | Human | 7314 | Details Get a Quote |
| TUBB4B Knockout A-549 Cell Line | EDJ-KQ23641 | Human | 10383 | Details Get a Quote |
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