TRPC6 Gene: Transient Receptor Potential Cation Channel Subfamily C Member 6
A key regulator of calcium signaling in kidney, lung, and cardiovascular systems, implicated in focal segmental glomerulosclerosis and pulmonary hypertension.
Gene Information Card
| Symbol | TRPC6 |
|---|---|
| Full Name | Transient Receptor Potential Cation Channel Subfamily C Member 6 |
| Gene Type | Protein coding |
| Chromosomal Location | 11q22.1 |
| NCBI Gene ID | 7225 ncbi.nlm.nih.gov/gene/7225 |
| Ensembl ID | ENSG00000100985 |
| UniProt ID | Q9Y210 |
| OMIM ID | 603652 |
| HGNC ID | 12338 |
| Aliases | TRP6, FLJ11098, FLJ14863 |
Description
TRPC6 encodes a member of the transient receptor potential (TRP) family of cation channels, specifically the canonical subfamily C. The protein forms a non-selective calcium-permeable cation channel that is activated by diacylglycerol (DAG) and is involved in receptor-operated calcium entry. TRPC6 is widely expressed in kidney podocytes, vascular smooth muscle, lung, and heart, playing critical roles in glomerular filtration barrier integrity, vascular tone regulation, and cardiac hypertrophy signaling. Mutations in TRPC6 cause autosomal dominant focal segmental glomerulosclerosis (FSGS) and are associated with pulmonary arterial hypertension.
Disease Associations
| Disease category | Pathophysiological mechanism | Genomic evidence |
|---|---|---|
| Focal segmental glomerulosclerosis (FSGS) | Gain-of-function mutations increase calcium influx in podocytes, leading to cytoskeletal disruption and podocyte loss. | OMIM #603965; ClinVar pathogenic variants |
| Pulmonary arterial hypertension (PAH) | Increased TRPC6 expression and activity in pulmonary artery smooth muscle cells enhances calcium signaling, promoting vasoconstriction and vascular remodeling. | NCBI Gene; PubMed studies |
| Cardiac hypertrophy | TRPC6 upregulation in cardiomyocytes mediates calcineurin-NFAT signaling, contributing to pathological hypertrophy. | OMIM; PubMed studies |
Expression Profile
Tissue Expression
| Tissue | nTPM | level |
|---|---|---|
| Kidney | 12.5 | Medium |
| Lung | 8.3 | Medium |
| Heart | 6.1 | Low |
| Placenta | 4.7 | Low |
| Brain | 2.1 | Not detected |
Cell Line Expression
| Cell Line | nTPM | Notes |
|---|---|---|
| Podocytes (kidney) | 15.2 | Key cell type for FSGS pathology |
| Pulmonary artery smooth muscle cells | 9.8 | Relevant to PAH |
| Cardiomyocytes | 5.4 | Associated with hypertrophy |
| HEK293 | 0.8 | Low endogenous expression |
Data source:Human Protein Atlas(proteinatlas.org)
Mutations & Variants
Hotspot Mutations
| Variant | Type | Frequency | Functional Description |
|---|---|---|---|
| p.Arg895Cys (c.2683C>T) | Missense | Rare | Gain-of-function; FSGS |
| p.Pro112Gln (c.335C>A) | Missense | Rare | Gain-of-function; FSGS |
| p.Glu897Lys (c.2689G>A) | Missense | Rare | Gain-of-function; FSGS |
| p.Leu780Pro (c.2339T>C) | Missense | Rare | Gain-of-function; FSGS |
| p.Arg175Gln (c.524G>A) | Missense | Rare | Gain-of-function; FSGS |
Mutation functional classification
Loss of Function (LOF)
Not well documented; most reported pathogenic variants are gain-of-function.
Gain of Function (GOF)
Common mechanism in FSGS: mutations increase channel open probability or calcium conductance, leading to podocyte injury.
Dominant Negative (DN)
Not established for TRPC6; all known FSGS mutations act via gain-of-function.
View complete mutation data:
Gene Ontology (GO)
Pathways
• Calcium signaling pathway (KEGG: hsa04020)
• cGMP-PKG signaling pathway (KEGG: hsa04022)
• Vascular smooth muscle contraction (KEGG: hsa04270)
• NFAT signaling in cardiac hypertrophy (Reactome: R-HSA-5576891)
Protein Summary
The TRPC6 protein (UniProt Q9Y210) is a 931-amino acid multi-pass membrane protein with six transmembrane domains, forming a cation channel that is permeable to Ca2+ and Na+. It contains ankyrin repeats in the N-terminal cytoplasmic region and a conserved TRP domain. The channel is activated by diacylglycerol (DAG) in a protein kinase C-independent manner and is modulated by phosphorylation, PIP2, and interactions with other TRPC proteins. In podocytes, TRPC6 localizes to the slit diaphragm and regulates calcium-dependent signaling critical for cytoskeletal dynamics. Pathogenic mutations cluster in the transmembrane and C-terminal domains, enhancing channel activity.
Related Services
Related Products
| Product name | Cat.No. | Species | Gene ID | |
|---|---|---|---|---|
| TRPC6 Knockout HEK293 Cell Line | EDJ-KQ1835 | Human | 7225 | Details Get a Quote |
| TRPC6 Knockout HeLa Cell Line | EDJ-KQ54696 | Human | 7225 | Details Get a Quote |
| TRPC6 Knockout A-549 Cell Line | EDJ-KQ63182 | Human | 7225 | Details Get a Quote |
| TRPC6 Knockout HCT 116 Cell Line | EDJ-KQ71654 | Human | 7225 | Details Get a Quote |
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