TMEM165
Transmembrane Protein 165: A Golgi Ion Transporter Linked to Congenital Disorders of Glycosylation
Gene Information Card
| Symbol | TMEM165 |
|---|---|
| Full Name | Transmembrane Protein 165 |
| Gene Type | Protein coding |
| Chromosomal Location | 4q12 |
| NCBI Gene ID | 55858 ncbi.nlm.nih.gov/gene/55858 |
| Ensembl ID | ENSG00000134853 |
| UniProt ID | Q9HC07 |
| OMIM ID | 614726 |
| HGNC ID | 30760 |
| Aliases | FLJ10156, MGC117188, TPARL |
Description
TMEM165 encodes a transmembrane protein localized to the Golgi apparatus, where it functions as a putative ion transporter critical for maintaining Golgi manganese (Mn²⁺) and pH homeostasis. Loss-of-function mutations in TMEM165 cause a specific subtype of congenital disorder of glycosylation (CDG), known as TMEM165-CDG (CDG-IIk), characterized by defective N- and O-glycosylation. The protein is essential for proper Golgi function, and its deficiency leads to impaired glycosylation of serum proteins and multiple organ systems involvement.
Disease Associations
| Disease category | Pathophysiological mechanism | Genomic evidence |
|---|---|---|
| Congenital disorder of glycosylation type IIk (CDG-IIk) | Loss-of-function mutations in TMEM165 disrupt Golgi Mn²⁺/H⁺ homeostasis, impairing glycosyltransferase activity and leading to underglycosylation of proteins. | OMIM #614727; ClinVar; PMID: 22541559 |
| Intellectual disability with developmental delay | Impaired glycosylation affects neuronal development and function; observed in TMEM165-CDG patients. | ClinVar; PMID: 22541559 |
| Skeletal dysplasia | Glycosylation defects in bone matrix proteins contribute to skeletal abnormalities in TMEM165-CDG. | OMIM #614727; PMID: 22541559 |
Expression Profile
Tissue Expression
| Tissue | nTPM | level |
|---|---|---|
| Liver | 12.5 | Medium |
| Kidney | 10.2 | Medium |
| Pancreas | 8.9 | Medium |
| Brain | 6.3 | Low |
| Heart | 5.1 | Low |
Cell Line Expression
| Cell Line | nTPM | Notes |
|---|---|---|
| HepG2 | 14.0 | Hepatocellular carcinoma cell line |
| HEK293 | 11.5 | Embryonic kidney cells |
| HeLa | 9.8 | Cervical cancer cells |
| K562 | 7.2 | Leukemia cells |
Data source:Human Protein Atlas(proteinatlas.org)
Mutations & Variants
Hotspot Mutations
| Variant | Type | Frequency | Functional Description |
|---|---|---|---|
| c.792G>C (p.Gln264His) | Missense | Found in multiple families | Loss of function; disrupts Golgi localization and ion transport |
| c.910C>T (p.Arg304Trp) | Missense | Rare | Reduced protein stability and impaired Mn²⁺ transport |
| c.1A>G (p.Met1Val) | Start loss | Singleton | Complete loss of protein expression |
Mutation functional classification
Loss of Function (LOF)
Yes; most reported TMEM165 mutations result in loss of ion transport activity, leading to Golgi pH and Mn²⁺ dysregulation.
Gain of Function (GOF)
No evidence of gain-of-function mutations.
Dominant Negative (DN)
Not reported; inheritance is autosomal recessive.
View complete mutation data:
Gene Ontology (GO)
| • Golgi membrane | • manganese ion transmembrane transporter activity |
| • Golgi organization | • protein glycosylation |
| • intracellular manganese ion homeostasis | • Golgi lumen acidification |
Pathways
• Congenital disorders of glycosylation
• Golgi-to-ER retrograde transport
• Manganese homeostasis
Protein Summary
TMEM165 is a 324-amino acid multi-pass transmembrane protein predominantly localized to the Golgi apparatus. It contains six transmembrane domains and functions as a putative Mn²⁺/H⁺ antiporter, regulating Golgi luminal pH and manganese concentration. Proper TMEM165 activity is required for the optimal function of Golgi-resident glycosyltransferases, which depend on Mn²⁺ as a cofactor. Loss of TMEM165 leads to Golgi alkalinization and Mn²⁺ deficiency, resulting in defective glycosylation. The protein is ubiquitously expressed, with highest levels in liver, kidney, and pancreas.
Related Services
Related Products
| Product name | Cat.No. | Species | Gene ID | |
|---|---|---|---|---|
| TMEM165 Knockout HEK293 Cell Line | EDJ-KQ11977 | Human | 55858 | Details Get a Quote |
| TMEM165 Knockout HeLa Cell Line | EDJ-KQ18205 | Human | 55858 | Details Get a Quote |
| TMEM165 Knockout A-549 Cell Line | EDJ-KQ40535 | Human | 55858 | Details Get a Quote |
| TMEM165 Knockout HCT 116 Cell Line | EDJ-KQ40536 | Human | 55858 | Details Get a Quote |