TAP2: Transporter Associated with Antigen Processing 2

Key component of the MHC class I antigen presentation pathway; mutations linked to immunodeficiency and autoimmune disorders.

Gene Information Card

Symbol TAP2
Full Name Transporter associated with antigen processing 2
Gene Type Protein coding
Chromosomal Location 6p21.32
NCBI Gene ID 6891 ncbi.nlm.nih.gov/gene/6891
Ensembl ID ENSG00000204267
UniProt ID Q03519
OMIM ID 170261
HGNC ID 43
Aliases ABCB3, PSF2, RING11, TAP2*01, TAP2*02

Description

The TAP2 gene encodes a subunit of the transporter associated with antigen processing (TAP) complex, which is essential for peptide translocation from the cytosol into the endoplasmic reticulum for loading onto MHC class I molecules. TAP2 forms a heterodimer with TAP1, and together they function as an ATP-binding cassette (ABC) transporter. Mutations in TAP2 impair antigen presentation, leading to immunodeficiency syndromes such as bare lymphocyte syndrome type I and increased susceptibility to infections and autoimmune conditions.

Disease Associations

Disease category Pathophysiological mechanism Genomic evidence
Bare lymphocyte syndrome type I Loss-of-function mutations in TAP2 disrupt peptide transport, reducing MHC class I surface expression and impairing CD8+ T-cell immunity. ClinVar, OMIM
Autoimmune disease (e.g., rheumatoid arthritis, type 1 diabetes) TAP2 polymorphisms may alter antigen presentation, influencing T-cell selection and autoimmune risk. NCBI Gene, OMIM
Immunodeficiency with recurrent infections Defective TAP2 leads to decreased MHC class I expression, compromising antiviral and antitumor immune responses. ClinVar, OMIM

Expression Profile

Tissue Expression
Tissue nTPM level
Lymph node 12.5 Medium
Spleen 10.8 Medium
Lung 8.3 Low
Small intestine 7.1 Low
Liver 5.9 Low
Cell Line Expression
Cell Line nTPM Notes
HEK 293 15.2 High expression in embryonic kidney cells
HeLa 12.0 Moderate expression in cervical cancer cells
K562 9.8 Moderate expression in leukemia cells
HepG2 7.5 Low expression in liver cancer cells
Data source:Human Protein Atlas(proteinatlas.org)

Mutations & Variants

Hotspot Mutations
Variant Type Frequency Functional Description
c.1478C>T (p.Thr493Ile) Missense Rare Reduced peptide transport activity; associated with bare lymphocyte syndrome
c.1643G>A (p.Arg548Gln) Missense Rare Impaired TAP complex assembly; linked to immunodeficiency
c.1976delA (p.Lys659Argfs*2) Frameshift Very rare Loss of function; truncation of C-terminal domain
Mutation functional classification

Loss of Function (LOF)

Most TAP2 mutations (missense, nonsense, frameshift) result in loss of peptide transport activity, leading to bare lymphocyte syndrome type I.

Gain of Function (GOF)

No gain-of-function mutations reported in TAP2.

Dominant Negative (DN)

No dominant-negative mutations reported; TAP2 deficiency is typically recessive.

Gene Ontology (GO)

• ATP binding • ATP hydrolysis activity
• peptide antigen transport • MHC class I protein complex assembly
• endoplasmic reticulum membrane • transmembrane transporter activity

Pathways

Antigen processing and presentation (KEGG hsa04612)
MHC class I antigen presentation (Reactome R-HSA-983170)

Protein Summary

TAP2 is a 703-amino acid ABC transporter subunit that, together with TAP1, forms a heterodimeric peptide transporter in the endoplasmic reticulum membrane. It contains a transmembrane domain (TMD) and a nucleotide-binding domain (NBD). ATP binding and hydrolysis drive conformational changes that allow peptide translocation. TAP2 is essential for loading antigenic peptides onto MHC class I molecules, a critical step in adaptive immunity.

Related Products

Product name Cat.No. Species Gene ID
TAP2 Knockout HEK293T Cell Line EDJ-KQ191 Human 6891 Details Get a Quote
KRTAP2-4 Knockout HEK293 Cell Line EDJ-KQ10327 Human 85294 Details Get a Quote
KRTAP2-2 Knockout HEK293 Cell Line EDJ-KQ10328 Human 728279 Details Get a Quote
KRTAP22-2 Knockout HEK293 Cell Line EDJ-KQ12057 Human 100288287 Details Get a Quote
KRTAP22-1 Knockout HEK293 Cell Line EDJ-KQ12067 Human 337979 Details Get a Quote
KRTAP23-1 Knockout HEK293 Cell Line EDJ-KQ12089 Human 337963 Details Get a Quote
KRTAP29-1 Knockout HEK293 Cell Line EDJ-KQ12102 Human 100533177 Details Get a Quote
KRTAP20-4 Knockout HEK293 Cell Line EDJ-KQ12115 Human 100151643 Details Get a Quote
KRTAP20-3 Knockout HEK293 Cell Line EDJ-KQ12116 Human 337985 Details Get a Quote
KRTAP20-1 Knockout HEK293 Cell Line EDJ-KQ12124 Human 337975 Details Get a Quote
KRTAP25-1 Knockout HEK293 Cell Line EDJ-KQ12131 Human 100131902 Details Get a Quote
KRTAP2-3 Knockout HEK293 Cell Line EDJ-KQ13246 Human 730755 Details Get a Quote
KRTAP27-1 Knockout HEK293 Cell Line EDJ-KQ13264 Human 643812 Details Get a Quote
KRTAP20-2 Knockout HEK293 Cell Line EDJ-KQ14011 Human 337976 Details Get a Quote
KRTAP21-1 Knockout HEK293 Cell Line EDJ-KQ14012 Human 337977 Details Get a Quote
Displaying Records 1 To 15 Of 82 Records
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