TAF15 Gene: TATA-Box Binding Protein Associated Factor 15
A key RNA-binding protein involved in transcription, RNA processing, and neurodegeneration; associated with amyotrophic lateral sclerosis (ALS) and frontotemporal dementia (FTD).
Gene Information Card
| Symbol | TAF15 |
|---|---|
| Full Name | TATA-Box Binding Protein Associated Factor 15 |
| Gene Type | Protein coding |
| Chromosomal Location | 17q11.2 |
| NCBI Gene ID | 8148 ncbi.nlm.nih.gov/gene/8148 |
| Ensembl ID | ENSG00000170345 |
| UniProt ID | Q92804 |
| OMIM ID | 601574 |
| HGNC ID | 11547 |
| Aliases | TAFII68, TAF2N, RBP56, Npl3 |
Description
TAF15 (TATA-Box Binding Protein Associated Factor 15) encodes a member of the FET protein family (FUS, EWSR1, TAF15). This RNA-binding protein is a component of the TFIID transcription complex and is involved in transcription initiation, RNA splicing, and RNA transport. TAF15 is predominantly nuclear but can shuttle to the cytoplasm. Mutations in TAF15 are associated with amyotrophic lateral sclerosis (ALS) and frontotemporal dementia (FTD). The protein also plays a role in DNA damage response and stress granule formation.
Disease Associations
| Disease category | Pathophysiological mechanism | Genomic evidence |
|---|---|---|
| Amyotrophic Lateral Sclerosis (ALS) | Mutations in TAF15 lead to cytoplasmic mislocalization and aggregation of the protein, contributing to motor neuron degeneration. | ClinVar, OMIM |
| Frontotemporal Dementia (FTD) | TAF15 mutations cause abnormal protein aggregation in neurons, leading to progressive neurodegeneration in frontal and temporal lobes. | ClinVar, OMIM |
| Cancer (various) | TAF15 gene fusions (e.g., TAF15-ATF1, TAF15-ZNF384) are oncogenic drivers in sarcomas and acute leukemias. | COSMIC, NCBI |
Expression Profile
Tissue Expression
| Tissue | nTPM | level |
|---|---|---|
| Brain | 12.5 nTPM | Medium |
| Spinal cord | 10.2 nTPM | Medium |
| Testis | 8.9 nTPM | Medium |
| Lung | 6.3 nTPM | Low |
| Heart | 5.1 nTPM | Low |
Cell Line Expression
| Cell Line | nTPM | Notes |
|---|---|---|
| SH-SY5Y (neuroblastoma) | 15.0 nTPM | Neuronal model |
| HeLa (cervical carcinoma) | 12.3 nTPM | High expression |
| HEK293 (embryonic kidney) | 10.8 nTPM | Common cell line |
| A549 (lung carcinoma) | 7.5 nTPM | Moderate expression |
Data source:Human Protein Atlas(proteinatlas.org)
Mutations & Variants
Hotspot Mutations
| Variant | Type | Frequency | Functional Description |
|---|---|---|---|
| p.Gly391Glu (G391E) | Missense | Rare | Impaired RNA binding and increased cytoplasmic aggregation; associated with ALS. |
| p.Arg216Cys (R216C) | Missense | Rare | Reduced nuclear localization; linked to FTD. |
| TAF15-ATF1 fusion | Gene fusion | Somatic | Oncogenic fusion in angiomatoid fibrous histiocytoma. |
| TAF15-ZNF384 fusion | Gene fusion | Somatic | Oncogenic fusion in acute lymphoblastic leukemia. |
Mutation functional classification
Loss of Function (LOF)
Loss-of-function mutations (e.g., truncations) impair RNA processing and transcription, contributing to neurodegeneration.
Gain of Function (GOF)
Gain-of-function mutations (e.g., missense in prion-like domain) promote aggregation and toxicity in ALS/FTD.
Dominant Negative (DN)
Dominant-negative effects are observed with certain missense mutations that disrupt normal TAF15 function in transcription complexes.
View complete mutation data:
Gene Ontology (GO)
Pathways
• TFIID transcription initiation complex
• RNA splicing (spliceosome)
• FET protein family signaling
• Amyotrophic lateral sclerosis (ALS) pathway
Protein Summary
TAF15 is a 592-amino acid RNA-binding protein belonging to the FET family. It contains an N-terminal QGSY-rich domain, a central RNA recognition motif (RRM), and a C-terminal RGG-rich region. The protein shuttles between nucleus and cytoplasm, participating in transcription, pre-mRNA splicing, and stress granule dynamics. Pathogenic mutations in the prion-like domain cause aggregation and are linked to ALS and FTD. TAF15 also forms oncogenic fusions in sarcomas and leukemias.
Related Services
Related Products
| Product name | Cat.No. | Species | Gene ID | |
|---|---|---|---|---|
| TAF15 Knockout HEK293 Cell Line | EDJ-KQ6177 | Human | 8148 | Details Get a Quote |
| TAF15 Knockout A-549 Cell Line | EDJ-KQ29999 | Human | 8148 | Details Get a Quote |
| TAF15 Knockout HCT 116 Cell Line | EDJ-KQ30000 | Human | 8148 | Details Get a Quote |
| TAF15 Knockout HeLa Cell Line | EDJ-KQ28693 | Human | 8148 | Details Get a Quote |