ST20-MTHFS Gene: A Read-Through Transcript with Potential Roles in Folate Metabolism and Cancer

Comprehensive reference for the ST20-MTHFS read-through gene, including genomic context, expression, and disease associations.

Gene Information Card

Symbol ST20-MTHFS
Full Name ST20-MTHFS readthrough
Gene Type Read-through transcript (protein coding)
Chromosomal Location Chromosome 15 (15q25.1)
NCBI Gene ID 100526739 ncbi.nlm.nih.gov/gene/100526739
Ensembl ID ENSG00000259431
UniProt ID Q5T4F5
OMIM ID None assigned
HGNC ID HGNC:37290
Aliases ST20, MTHFS, 5-formyltetrahydrofolate cyclo-ligase

Description

ST20-MTHFS is a read-through transcript located on chromosome 15 at 15q25.1. This gene is formed by the fusion of two neighboring genes: ST20 (also known as ST20) and MTHFS (5,10-methenyltetrahydrofolate synthetase). The read-through produces a single mRNA transcript that encodes a protein with domains from both parental genes. The MTHFS portion of the protein is known to be involved in folate metabolism, specifically catalyzing the conversion of 5-formyltetrahydrofolate to 5,10-methenyltetrahydrofolate. The function of the ST20 portion is less well characterized, but it may play a role in cellular processes. The read-through transcript is expressed in various tissues and has been implicated in some cancers, although its specific biological role is still under investigation.

Disease Associations

Disease category Pathophysiological mechanism Genomic evidence
Cancer (various) Altered expression of the ST20-MTHFS read-through transcript has been observed in certain cancers. The MTHFS domain may influence folate metabolism, potentially affecting DNA synthesis and methylation, which are critical in tumorigenesis. Expression data from cancer cell lines and some tumor samples (e.g., COSMIC). The specific mechanism is not fully defined.

Expression Profile

Tissue Expression
Tissue nTPM level
Testis 12.5 Medium
Kidney 8.2 Low
Liver 6.1 Low
Brain 4.5 Low
Lung 3.8 Low
Cell Line Expression
Cell Line nTPM Notes
K-562 (Leukemia) 15.3 High expression
HeLa (Cervical Cancer) 9.7 Medium expression
A549 (Lung Cancer) 7.1 Medium expression
MCF7 (Breast Cancer) 5.4 Low expression
Data source:Human Protein Atlas(proteinatlas.org)

Mutations & Variants

Hotspot Mutations
Variant Type Frequency Functional Description
c.452C>T (p.Pro151Leu) Missense Not established Located in the MTHFS domain; potential to affect enzyme activity, but no functional data available.
c.788A>G (p.Asn263Ser) Missense Not established Located in the ST20 domain; functional impact unknown.
Mutation functional classification

Loss of Function (LOF)

No specific loss-of-function mutations have been characterized for the ST20-MTHFS read-through protein. Mutations in the MTHFS domain could theoretically reduce catalytic activity, but this has not been experimentally validated.

Gain of Function (GOF)

No gain-of-function mutations have been identified.

Dominant Negative (DN)

No dominant-negative effects have been described.

Gene Ontology (GO)

• ATP binding (GO:0005524) • 5-formyltetrahydrofolate cyclo-ligase activity (GO:0004326)
• one-carbon metabolic process (GO:0006730) • cytosol (GO:0005829)

Pathways

• Folate Metabolism (Reactome: R-HSA-196757)
• One-carbon metabolism

Protein Summary

The ST20-MTHFS protein is a fusion protein encoded by a read-through transcript. It contains an N-terminal domain from the ST20 protein and a C-terminal domain from the MTHFS protein. The MTHFS domain is predicted to have 5-formyltetrahydrofolate cyclo-ligase activity, which is involved in the interconversion of folate derivatives. The ST20 domain's function is less clear but may be involved in protein-protein interactions. The protein is predicted to be localized in the cytosol. Its exact biological role is still being studied, but it may play a role in regulating folate metabolism and cellular growth.

Related Products

Product name Cat.No. Species Gene ID
ST20-MTHFS Knockout HEK293 Cell Line EDJ-KQ52486 Human 100528021 Details Get a Quote
ST20-MTHFS Knockout HeLa Cell Line EDJ-KQ60949 Human 100528021 Details Get a Quote
ST20-MTHFS Knockout A-549 Cell Line EDJ-KQ69424 Human 100528021 Details Get a Quote
ST20-MTHFS Knockout HCT 116 Cell Line EDJ-KQ77775 Human 100528021 Details Get a Quote
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