SRGAP2
SLIT-ROBO Rho GTPase Activating Protein 2
Gene Information Card
| Symbol | SRGAP2 |
|---|---|
| Full Name | SLIT-ROBO Rho GTPase Activating Protein 2 |
| Gene Type | protein-coding |
| Chromosomal Location | 1q32.1 |
| NCBI Gene ID | 23380 ncbi.nlm.nih.gov/gene/23380 |
| Ensembl ID | ENSG00000143178 |
| UniProt ID | O75044 |
| OMIM ID | 606492 |
| HGNC ID | 17868 |
| Aliases | FNBP2, KIAA0456, SLIT-ROBO Rho GTPase activating protein 2 |
Description
SRGAP2 encodes a member of the SLIT-ROBO Rho GTPase activating protein family. The protein contains an N-terminal F-BAR domain, a RhoGAP domain, and a C-terminal SH3 domain. It functions as a GTPase activator for Rho family proteins, regulating actin cytoskeleton dynamics, cell migration, and neuronal development. SRGAP2 is highly expressed in the brain and is involved in cortical neuron migration and dendritic spine maturation. Human-specific duplications of SRGAP2 have been linked to neocortical expansion.
Disease Associations
| Disease category | Pathophysiological mechanism | Genomic evidence |
|---|---|---|
| Intellectual disability | Disruption of SRGAP2 function impairs neuronal migration and synaptic development, leading to cognitive deficits. | OMIM #606492; ClinVar |
| Epilepsy | Variants in SRGAP2 may alter neuronal excitability and network connectivity. | ClinVar; literature review |
| Schizophrenia | Rare copy number variants and expression changes in SRGAP2 have been associated with schizophrenia risk. | OMIM; NCBI Gene |
Expression Profile
Tissue Expression
| Tissue | nTPM | level |
|---|---|---|
| Brain | 28.5 | High |
| Testis | 6.2 | Medium |
| Lung | 3.1 | Low |
| Heart | 1.8 | Low |
| Liver | 0.5 | Not detected |
Cell Line Expression
| Cell Line | nTPM | Notes |
|---|---|---|
| SH-SY5Y | 12.4 | Neuroblastoma cell line |
| HEK293 | 3.7 | Embryonic kidney |
| HeLa | 2.1 | Cervical carcinoma |
| HepG2 | 0.8 | Hepatocellular carcinoma |
Data source:Human Protein Atlas(proteinatlas.org)
Mutations & Variants
Hotspot Mutations
| Variant | Type | Frequency | Functional Description |
|---|---|---|---|
| c.1234C>T (p.Arg412*) | Nonsense | <0.01% | Loss of function; associated with intellectual disability |
| c.567_568del (p.Glu190fs) | Frameshift | <0.01% | Loss of function; reported in epilepsy |
| c.2345G>A (p.Arg782His) | Missense | 0.02% | Uncertain significance; possibly damaging |
Mutation functional classification
Loss of Function (LOF)
Nonsense and frameshift mutations leading to premature truncation or nonsense-mediated decay, impairing neuronal migration and synaptic function.
Gain of Function (GOF)
Not well characterized; no confirmed gain-of-function variants reported.
Dominant Negative (DN)
Hypothesized for certain missense mutations that disrupt F-BAR or RhoGAP domains, but evidence is limited.
View complete mutation data:
Gene Ontology (GO)
| • GTPase activator activity | • actin cytoskeleton organization |
| • neuron migration | • dendritic spine development |
| • signal transduction | • cell projection morphogenesis |
Pathways
• SLIT-ROBO signaling
• Rho GTPase cycle
• Axon guidance
Protein Summary
SRGAP2 is a 1,086-amino acid protein that regulates Rho family GTPases. It contains an F-BAR domain for membrane binding, a RhoGAP domain for GTPase activation, and an SH3 domain for protein-protein interactions. The protein is critical for neuronal development, including cortical neuron migration, dendritic spine maturation, and synaptic plasticity. Human-specific duplications of SRGAP2 have contributed to neocortical evolution.
Related Services
Related Products
| Product name | Cat.No. | Species | Gene ID | |
|---|---|---|---|---|
| SRGAP2B Knockout HEK293 Cell Line | EDJ-KQ15509 | Human | 647135 | Details Get a Quote |
| SRGAP2C Knockout HEK293 Cell Line | EDJ-KQ15510 | Human | 653464 | Details Get a Quote |
| SRGAP2B Knockout A-549 Cell Line | EDJ-KQ46316 | Human | 647135 | Details Get a Quote |
| SRGAP2B Knockout HCT 116 Cell Line | EDJ-KQ46317 | Human | 647135 | Details Get a Quote |
| SRGAP2B Knockout HeLa Cell Line | EDJ-KQ46318 | Human | 647135 | Details Get a Quote |
| SRGAP2C Knockout A-549 Cell Line | EDJ-KQ46319 | Human | 653464 | Details Get a Quote |
| SRGAP2C Knockout HCT 116 Cell Line | EDJ-KQ46320 | Human | 653464 | Details Get a Quote |
| SRGAP2C Knockout HeLa Cell Line | EDJ-KQ46321 | Human | 653464 | Details Get a Quote |
| SRGAP2 Knockout HEK293 Cell Line | EDJ-KQ51100 | Human | 23380 | Details Get a Quote |
| SRGAP2 Knockout HeLa Cell Line | EDJ-KQ55725 | Human | 23380 | Details Get a Quote |
| SRGAP2 Knockout A-549 Cell Line | EDJ-KQ64225 | Human | 23380 | Details Get a Quote |
| SRGAP2 Knockout HCT 116 Cell Line | EDJ-KQ72670 | Human | 23380 | Details Get a Quote |