SLC5A1 (Solute Carrier Family 5 Member 1): Glucose-Galactose Malabsorption and Beyond

A comprehensive biomedical overview of SLC5A1, encoding the intestinal sodium/glucose cotransporter SGLT1, including gene structure, expression, disease associations, mutations, and functional classification.

Gene Information Card

Symbol SLC5A1
Full Name Solute carrier family 5 member 1
Gene Type protein-coding
Chromosomal Location 22q12.3
NCBI Gene ID 6523 ncbi.nlm.nih.gov/gene/6523
Ensembl ID ENSG00000100170
UniProt ID P13866
OMIM ID 182380
HGNC ID 11036
Aliases SGLT1, D22S675, FLJ41780

Description

SLC5A1 encodes the sodium/glucose cotransporter 1 (SGLT1), a member of the solute carrier family 5. SGLT1 is primarily expressed in the brush border of intestinal epithelial cells and renal proximal tubules, where it mediates active transport of glucose and galactose across cell membranes coupled with sodium. This transporter is critical for dietary sugar absorption and renal glucose reabsorption. Mutations in SLC5A1 cause glucose-galactose malabsorption, a rare autosomal recessive disorder characterized by severe diarrhea in infancy. SGLT1 also plays roles in other tissues and has been implicated in various physiological and pathological processes.

Disease Associations

Disease category Pathophysiological mechanism Genomic evidence
Glucose-galactose malabsorption Loss-of-function mutations in SLC5A1 impair intestinal glucose and galactose transport, leading to osmotic diarrhea and dehydration. OMIM #182380; ClinVar; multiple case reports
Renal glucosuria (possible) Defective SGLT1 in renal proximal tubules reduces glucose reabsorption, causing glucosuria, though primary renal glucosuria is more often due to SGLT2 mutations. OMIM #233100 (related); limited evidence for SLC5A1
Type 2 diabetes (modifier) Variants in SLC5A1 may influence intestinal glucose absorption and glycemic response, but evidence is not definitive. GWAS and candidate gene studies; not a primary cause
Inflammatory bowel disease (possible) Altered SGLT1 expression may affect intestinal barrier function and inflammation, but direct causal link is unclear. Expression studies; not a confirmed Mendelian cause

Expression Profile

Tissue Expression
Tissue nTPM level
Small intestine High (e.g., 100+ nTPM) Major site of expression; brush border of enterocytes
Kidney Moderate (e.g., 50-100 nTPM) Proximal tubule segments S1/S2
Salivary gland Low Detected in ductal cells
Liver Low Minimal expression
Brain Low Detected in some regions, but function unclear
Cell Line Expression
Cell Line nTPM Notes
Caco-2 High Intestinal epithelial cell line; used for transport studies
HK-2 Moderate Renal proximal tubule cell line
HepG2 Low Hepatocellular carcinoma cell line
A549 Low Lung carcinoma cell line; minimal expression
Data source:Human Protein Atlas(proteinatlas.org)

Mutations & Variants

Hotspot Mutations
Variant Type Frequency Functional Description
c.92G>A (p.Trp31Ter) Nonsense Rare (found in GGM patients) Premature stop; loss of function
c.457C>T (p.Arg153Ter) Nonsense Rare Loss of function
c.958C>T (p.Arg320Ter) Nonsense Rare Loss of function
c.1210G>A (p.Asp404Asn) Missense Rare Impaired trafficking or transport activity
c.1663C>T (p.Arg555Cys) Missense Rare Reduced transport function
c.1813C>T (p.Arg605Ter) Nonsense Rare Loss of function
Mutation functional classification

Loss of Function (LOF)

Most SLC5A1 mutations associated with glucose-galactose malabsorption are loss-of-function, including nonsense, frameshift, and missense variants that impair protein synthesis, trafficking, or transport activity.

Gain of Function (GOF)

No gain-of-function mutations have been reported for SLC5A1; such mutations would likely increase glucose absorption and are not observed in human disease.

Dominant Negative (DN)

No dominant-negative mutations are documented; GGM is inherited in an autosomal recessive manner, and heterozygous carriers are typically asymptomatic.

Gene Ontology (GO)

• glucose: sodium symporter activity • galactose: sodium symporter activity
• transmembrane transport • carbohydrate transport
• sodium ion transport • plasma membrane
• integral component of membrane

Pathways

Carbohydrate digestion and absorption (KEGG hsa04973)
Sodium/glucose cotransporter activity in renal reabsorption
Transport of glucose and other sugars (Reactome)

Protein Summary

SGLT1 is a 664-amino acid integral membrane protein with 14 transmembrane helices. It couples the downhill influx of sodium to the uphill transport of glucose or galactose, with a stoichiometry of 2 Na+:1 sugar. The protein is heavily glycosylated and localized to the apical membrane of enterocytes and renal proximal tubule cells. Its structure includes a core domain for sugar binding and a gate domain for conformational changes. SGLT1 is also expressed in other tissues, where it may have non-transport functions, such as in glucose sensing. The protein is a target for pharmacological inhibition in diabetes (e.g., SGLT inhibitors), though SGLT2 is the primary target in the kidney.

Related Products

Product name Cat.No. Species Gene ID
SLC5A1 Knockout HEK293 Cell Line EDJ-KQ5767 Human 6523 Details Get a Quote
SLC5A11 Knockout HEK293 Cell Line EDJ-KQ7526 Human 115584 Details Get a Quote
SLC5A10 Knockout HEK293 Cell Line EDJ-KQ8777 Human 125206 Details Get a Quote
SLC5A12 Knockout HEK293 Cell Line EDJ-KQ15281 Human 159963 Details Get a Quote
SLC5A11 Knockout A-549 Cell Line EDJ-KQ32805 Human 115584 Details Get a Quote
SLC5A1 Knockout HeLa Cell Line EDJ-KQ54486 Human 6523 Details Get a Quote
SLC5A11 Knockout HeLa Cell Line EDJ-KQ57957 Human 115584 Details Get a Quote
SLC5A10 Knockout HeLa Cell Line EDJ-KQ58152 Human 125206 Details Get a Quote
SLC5A12 Knockout HeLa Cell Line EDJ-KQ58806 Human 159963 Details Get a Quote
SLC5A1 Knockout A-549 Cell Line EDJ-KQ62972 Human 6523 Details Get a Quote
SLC5A10 Knockout A-549 Cell Line EDJ-KQ66635 Human 125206 Details Get a Quote
SLC5A12 Knockout A-549 Cell Line EDJ-KQ67290 Human 159963 Details Get a Quote
SLC5A1 Knockout HCT 116 Cell Line EDJ-KQ71443 Human 6523 Details Get a Quote
SLC5A11 Knockout HCT 116 Cell Line EDJ-KQ74869 Human 115584 Details Get a Quote
SLC5A10 Knockout HCT 116 Cell Line EDJ-KQ75056 Human 125206 Details Get a Quote
Displaying Records 1 To 15 Of 17 Records
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