SLC5A1 (Solute Carrier Family 5 Member 1): Glucose-Galactose Malabsorption and Beyond
A comprehensive biomedical overview of SLC5A1, encoding the intestinal sodium/glucose cotransporter SGLT1, including gene structure, expression, disease associations, mutations, and functional classification.
Gene Information Card
| Symbol | SLC5A1 |
|---|---|
| Full Name | Solute carrier family 5 member 1 |
| Gene Type | protein-coding |
| Chromosomal Location | 22q12.3 |
| NCBI Gene ID | 6523 ncbi.nlm.nih.gov/gene/6523 |
| Ensembl ID | ENSG00000100170 |
| UniProt ID | P13866 |
| OMIM ID | 182380 |
| HGNC ID | 11036 |
| Aliases | SGLT1, D22S675, FLJ41780 |
Description
SLC5A1 encodes the sodium/glucose cotransporter 1 (SGLT1), a member of the solute carrier family 5. SGLT1 is primarily expressed in the brush border of intestinal epithelial cells and renal proximal tubules, where it mediates active transport of glucose and galactose across cell membranes coupled with sodium. This transporter is critical for dietary sugar absorption and renal glucose reabsorption. Mutations in SLC5A1 cause glucose-galactose malabsorption, a rare autosomal recessive disorder characterized by severe diarrhea in infancy. SGLT1 also plays roles in other tissues and has been implicated in various physiological and pathological processes.
Disease Associations
| Disease category | Pathophysiological mechanism | Genomic evidence |
|---|---|---|
| Glucose-galactose malabsorption | Loss-of-function mutations in SLC5A1 impair intestinal glucose and galactose transport, leading to osmotic diarrhea and dehydration. | OMIM #182380; ClinVar; multiple case reports |
| Renal glucosuria (possible) | Defective SGLT1 in renal proximal tubules reduces glucose reabsorption, causing glucosuria, though primary renal glucosuria is more often due to SGLT2 mutations. | OMIM #233100 (related); limited evidence for SLC5A1 |
| Type 2 diabetes (modifier) | Variants in SLC5A1 may influence intestinal glucose absorption and glycemic response, but evidence is not definitive. | GWAS and candidate gene studies; not a primary cause |
| Inflammatory bowel disease (possible) | Altered SGLT1 expression may affect intestinal barrier function and inflammation, but direct causal link is unclear. | Expression studies; not a confirmed Mendelian cause |
Expression Profile
Tissue Expression
| Tissue | nTPM | level |
|---|---|---|
| Small intestine | High (e.g., 100+ nTPM) | Major site of expression; brush border of enterocytes |
| Kidney | Moderate (e.g., 50-100 nTPM) | Proximal tubule segments S1/S2 |
| Salivary gland | Low | Detected in ductal cells |
| Liver | Low | Minimal expression |
| Brain | Low | Detected in some regions, but function unclear |
Cell Line Expression
| Cell Line | nTPM | Notes |
|---|---|---|
| Caco-2 | High | Intestinal epithelial cell line; used for transport studies |
| HK-2 | Moderate | Renal proximal tubule cell line |
| HepG2 | Low | Hepatocellular carcinoma cell line |
| A549 | Low | Lung carcinoma cell line; minimal expression |
Data source:Human Protein Atlas(proteinatlas.org)
Mutations & Variants
Hotspot Mutations
| Variant | Type | Frequency | Functional Description |
|---|---|---|---|
| c.92G>A (p.Trp31Ter) | Nonsense | Rare (found in GGM patients) | Premature stop; loss of function |
| c.457C>T (p.Arg153Ter) | Nonsense | Rare | Loss of function |
| c.958C>T (p.Arg320Ter) | Nonsense | Rare | Loss of function |
| c.1210G>A (p.Asp404Asn) | Missense | Rare | Impaired trafficking or transport activity |
| c.1663C>T (p.Arg555Cys) | Missense | Rare | Reduced transport function |
| c.1813C>T (p.Arg605Ter) | Nonsense | Rare | Loss of function |
Mutation functional classification
Loss of Function (LOF)
Most SLC5A1 mutations associated with glucose-galactose malabsorption are loss-of-function, including nonsense, frameshift, and missense variants that impair protein synthesis, trafficking, or transport activity.
Gain of Function (GOF)
No gain-of-function mutations have been reported for SLC5A1; such mutations would likely increase glucose absorption and are not observed in human disease.
Dominant Negative (DN)
No dominant-negative mutations are documented; GGM is inherited in an autosomal recessive manner, and heterozygous carriers are typically asymptomatic.
View complete mutation data:
Gene Ontology (GO)
| • glucose: sodium symporter activity | • galactose: sodium symporter activity |
| • transmembrane transport | • carbohydrate transport |
| • sodium ion transport | • plasma membrane |
| • integral component of membrane |
Pathways
• Carbohydrate digestion and absorption (KEGG hsa04973)
• Sodium/glucose cotransporter activity in renal reabsorption
• Transport of glucose and other sugars (Reactome)
Protein Summary
SGLT1 is a 664-amino acid integral membrane protein with 14 transmembrane helices. It couples the downhill influx of sodium to the uphill transport of glucose or galactose, with a stoichiometry of 2 Na+:1 sugar. The protein is heavily glycosylated and localized to the apical membrane of enterocytes and renal proximal tubule cells. Its structure includes a core domain for sugar binding and a gate domain for conformational changes. SGLT1 is also expressed in other tissues, where it may have non-transport functions, such as in glucose sensing. The protein is a target for pharmacological inhibition in diabetes (e.g., SGLT inhibitors), though SGLT2 is the primary target in the kidney.
Related Services
Related Products
| Product name | Cat.No. | Species | Gene ID | |
|---|---|---|---|---|
| SLC5A1 Knockout HEK293 Cell Line | EDJ-KQ5767 | Human | 6523 | Details Get a Quote |
| SLC5A11 Knockout HEK293 Cell Line | EDJ-KQ7526 | Human | 115584 | Details Get a Quote |
| SLC5A10 Knockout HEK293 Cell Line | EDJ-KQ8777 | Human | 125206 | Details Get a Quote |
| SLC5A12 Knockout HEK293 Cell Line | EDJ-KQ15281 | Human | 159963 | Details Get a Quote |
| SLC5A11 Knockout A-549 Cell Line | EDJ-KQ32805 | Human | 115584 | Details Get a Quote |
| SLC5A1 Knockout HeLa Cell Line | EDJ-KQ54486 | Human | 6523 | Details Get a Quote |
| SLC5A11 Knockout HeLa Cell Line | EDJ-KQ57957 | Human | 115584 | Details Get a Quote |
| SLC5A10 Knockout HeLa Cell Line | EDJ-KQ58152 | Human | 125206 | Details Get a Quote |
| SLC5A12 Knockout HeLa Cell Line | EDJ-KQ58806 | Human | 159963 | Details Get a Quote |
| SLC5A1 Knockout A-549 Cell Line | EDJ-KQ62972 | Human | 6523 | Details Get a Quote |
| SLC5A10 Knockout A-549 Cell Line | EDJ-KQ66635 | Human | 125206 | Details Get a Quote |
| SLC5A12 Knockout A-549 Cell Line | EDJ-KQ67290 | Human | 159963 | Details Get a Quote |
| SLC5A1 Knockout HCT 116 Cell Line | EDJ-KQ71443 | Human | 6523 | Details Get a Quote |
| SLC5A11 Knockout HCT 116 Cell Line | EDJ-KQ74869 | Human | 115584 | Details Get a Quote |
| SLC5A10 Knockout HCT 116 Cell Line | EDJ-KQ75056 | Human | 125206 | Details Get a Quote |
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