SLC25A3: Solute Carrier Family 25 Member 3
Mitochondrial Phosphate Carrier – Role in Oxidative Phosphorylation and Disease
Gene Information Card
| Symbol | SLC25A3 |
|---|---|
| Full Name | Solute carrier family 25 member 3 |
| Gene Type | Protein coding |
| Chromosomal Location | 12q23.1 |
| NCBI Gene ID | 5250 ncbi.nlm.nih.gov/gene/5250 |
| Ensembl ID | ENSG00000175489 |
| UniProt ID | Q00325 |
| OMIM ID | 600370 |
| HGNC ID | 10989 |
| Aliases | PHC, PTP, MGC111102 |
Description
SLC25A3 encodes the mitochondrial phosphate carrier (PiC), a transmembrane protein located in the inner mitochondrial membrane. It mediates the import of inorganic phosphate (Pi) into the mitochondrial matrix, which is essential for oxidative phosphorylation and ATP synthesis. The gene produces two splice variants: isoform A (heart/muscle) and isoform B (ubiquitous). Mutations in SLC25A3 cause mitochondrial phosphate carrier deficiency, a rare autosomal recessive disorder characterized by hypertrophic cardiomyopathy, muscle weakness, and lactic acidosis.
Disease Associations
| Disease category | Pathophysiological mechanism | Genomic evidence |
|---|---|---|
| Mitochondrial phosphate carrier deficiency | Loss-of-function mutations impair Pi import into mitochondria, reducing ATP production and causing energy deficiency in heart and muscle. | OMIM #610773; ClinVar pathogenic variants |
| Hypertrophic cardiomyopathy | Secondary to mitochondrial dysfunction; reduced ATP leads to compensatory cardiac hypertrophy. | Case reports (Mayr et al., 2011, PMID: 21228398) |
| Lactic acidosis | Impaired oxidative phosphorylation shifts metabolism to glycolysis, increasing lactate production. | Biochemical evidence in patients with SLC25A3 mutations |
Expression Profile
Tissue Expression
| Tissue | nTPM | level |
|---|---|---|
| Heart | 27.8 | High |
| Skeletal muscle | 18.5 | High |
| Liver | 9.2 | Medium |
| Kidney | 8.1 | Medium |
| Brain | 6.3 | Medium |
Cell Line Expression
| Cell Line | nTPM | Notes |
|---|---|---|
| HeLa | 15.2 | Ubiquitous expression |
| HEK293 | 12.8 | Moderate expression |
| HepG2 | 10.5 | Moderate expression |
| K562 | 7.1 | Low expression |
Data source:Human Protein Atlas(proteinatlas.org)
Mutations & Variants
Hotspot Mutations
| Variant | Type | Frequency | Functional Description |
|---|---|---|---|
| c.215G>A (p.Gly72Asp) | Missense | Rare | Loss of phosphate transport activity; associated with mitochondrial phosphate carrier deficiency |
| c.158C>T (p.Thr53Ile) | Missense | Rare | Impaired protein stability and function |
| c.439C>T (p.Arg147Trp) | Missense | Rare | Reduced Pi uptake in yeast complementation assays |
Mutation functional classification
Loss of Function (LOF)
Most reported missense mutations (e.g., p.Gly72Asp, p.Thr53Ile) reduce or abolish phosphate transport, leading to mitochondrial energy deficiency.
Gain of Function (GOF)
No gain-of-function mutations reported.
Dominant Negative (DN)
No dominant-negative mechanism described; disease is autosomal recessive.
View complete mutation data:
Gene Ontology (GO)
| • inorganic phosphate transmembrane transporter activity (GO:0005315) | • integral component of membrane (GO:0016021) |
| • mitochondrial inner membrane (GO:0005743) | • phosphate ion transport (GO:0006817) |
| • antiporter activity (GO:0015297) |
Pathways
• Mitochondrial phosphate carrier (SLC25A3) – Reactome R-HSA-8949215
• Oxidative phosphorylation – KEGG hsa00190
• Mitochondrial transport – WikiPathways WP111
Protein Summary
The SLC25A3 protein (mitochondrial phosphate carrier) is a 362-amino acid transmembrane protein with six alpha-helical domains. It forms a homodimer and functions as a phosphate/hydroxyl antiporter or phosphate/proton symporter. The protein is essential for providing inorganic phosphate for ATP synthesis via ATP synthase. Isoform A is predominantly expressed in heart and skeletal muscle, while isoform B is found in all tissues. Defects in this protein lead to impaired mitochondrial energy production.
Related Services
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|---|---|---|---|---|
| SLC25A31 Knockout HEK293 Cell Line | EDJ-KQ1629 | Human | 83447 | Details Get a Quote |
| SLC25A39 Knockout HEK293 Cell Line | EDJ-KQ3773 | Human | 51629 | Details Get a Quote |
| SLC25A37 Knockout HEK293 Cell Line | EDJ-KQ11040 | Human | 51312 | Details Get a Quote |
| SLC25A30 Knockout HEK293 Cell Line | EDC08114 | Human | 253512 | Details Get a Quote |
| SLC25A34 Knockout HEK293 Cell Line | EDJ-KQ15310 | Human | 284723 | Details Get a Quote |
| SLC25A35 Knockout HEK293 Cell Line | EDJ-KQ15311 | Human | 399512 | Details Get a Quote |
| SLC25A36 Knockout HEK293 Cell Line | EDJ-KQ15312 | Human | 55186 | Details Get a Quote |
| SLC25A38 Knockout HEK293 Cell Line | EDJ-KQ15313 | Human | 54977 | Details Get a Quote |
| SLC25A37 Knockout A-549 Cell Line | EDJ-KQ38942 | Human | 51312 | Details Get a Quote |
| SLC25A37 Knockout HCT 116 Cell Line | EDC07724 | Human | 51312 | Details Get a Quote |
| SLC25A37 Knockout HeLa Cell Line | EDJ-KQ38944 | Human | 51312 | Details Get a Quote |
| SLC25A30 Knockout A-549 Cell Line | EDJ-KQ40100 | Human | 253512 | Details Get a Quote |
| SLC25A30 Knockout HCT 116 Cell Line | EDJ-KQ40101 | Human | 253512 | Details Get a Quote |
| SLC25A30 Knockout HeLa Cell Line | EDJ-KQ40102 | Human | 253512 | Details Get a Quote |
| SLC25A35 Knockout HCT 116 Cell Line | EDJ-KQ46013 | Human | 399512 | Details Get a Quote |
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