SLC1A1: Solute Carrier Family 1 Member 1

Glutamate Transporter EAAT3 in Neurotransmission and Metabolism

Gene Information Card

Symbol SLC1A1
Full Name Solute Carrier Family 1 Member 1
Gene Type protein-coding
Chromosomal Location 9p24.2
NCBI Gene ID 6505 ncbi.nlm.nih.gov/gene/6505
Ensembl ID ENSG00000106688
UniProt ID P43004
OMIM ID 133550
HGNC ID 10941
Aliases EAAT3, EAAC1, EAAT3

Description

SLC1A1 (Solute Carrier Family 1 Member 1) encodes the excitatory amino acid transporter 3 (EAAT3), a sodium- and potassium-coupled high-affinity glutamate transporter. EAAT3 is primarily expressed in neurons, kidney, and intestine, where it mediates the uptake of L-glutamate and L-aspartate. It plays a critical role in terminating glutamatergic neurotransmission, maintaining glutamate homeostasis, and providing glutamate for glutathione synthesis. Mutations in SLC1A1 cause dicarboxylic aminoaciduria (OMIM 222730) and have been implicated in obsessive-compulsive disorder, schizophrenia, and epilepsy.

Disease Associations

Disease category Pathophysiological mechanism Genomic evidence
Dicarboxylic Aminoaciduria Loss-of-function mutations impair renal and intestinal reabsorption of glutamate and aspartate, leading to increased urinary excretion. OMIM 222730, ClinVar
Obsessive-Compulsive Disorder (OCD) Altered glutamate transport in cortico-striatal circuits; SLC1A1 variants associated with OCD susceptibility. PMID 16936799, 17997358
Schizophrenia Reduced EAAT3 expression in prefrontal cortex may contribute to glutamatergic dysfunction. PMID 18385393
Epilepsy Impaired glutamate clearance leads to excitotoxicity and seizure susceptibility. PMID 21402109

Expression Profile

Tissue Expression
Tissue nTPM level
Brain 12.5 High
Kidney 8.2 Medium
Small Intestine 6.1 Medium
Liver 1.3 Low
Heart 0.8 Low
Cell Line Expression
Cell Line nTPM Notes
SH-SY5Y (neuroblastoma) 15.3 High expression
HEK293 (embryonic kidney) 9.7 Moderate expression
Caco-2 (colorectal) 5.4 Low expression
HepG2 (hepatocellular) 1.1 Very low
Data source:Human Protein Atlas(proteinatlas.org)

Mutations & Variants

Hotspot Mutations
Variant Type Frequency Functional Description
c.1285C>T (p.Arg429*) Nonsense <0.01% Loss of function; truncation of EAAT3
c.1199G>A (p.Arg400His) Missense <0.01% Reduced glutamate transport activity
c.154G>A (p.Gly52Arg) Missense <0.01% Impaired trafficking to plasma membrane
c.1A>G (p.Met1?) Start loss <0.01% No protein production
Mutation functional classification

Loss of Function (LOF)

Nonsense and missense mutations (e.g., p.Arg429*, p.Arg400His) reduce or abolish glutamate transport, causing dicarboxylic aminoaciduria.

Gain of Function (GOF)

No confirmed gain-of-function mutations reported in SLC1A1.

Dominant Negative (DN)

Not established; SLC1A1 functions as a monomer, dominant-negative effects are unlikely.

Pathways

Glutamatergic synapse (KEGG hsa04724)
Neuroactive ligand-receptor interaction (KEGG hsa04080)
Transport of glucose and other sugars
bile salts and organic acids
metal ions and amine compounds (Reactome R-HSA-425366)

Protein Summary

EAAT3 (Excitatory Amino Acid Transporter 3) is a 523-amino acid membrane protein with 8-10 transmembrane domains. It couples the transport of one glutamate molecule with the co-transport of three Na+ and one H+ and the counter-transport of one K+. EAAT3 is the major neuronal glutamate transporter in the brain and also mediates the uptake of cysteine for glutathione synthesis, linking it to antioxidant defense. The protein is localized to the plasma membrane and intracellular vesicles, with regulated trafficking in response to neuronal activity.

Related Products

Product name Cat.No. Species Gene ID
SLC1A1 Knockout HEK293 Cell Line EDJ-KQ5760 Human 6505 Details Get a Quote
SLC1A1 Knockout A-549 Cell Line EDJ-KQ29174 Human 6505 Details Get a Quote
SLC1A1 Knockout HCT 116 Cell Line EDJ-KQ29175 Human 6505 Details Get a Quote
SLC1A1 Knockout HeLa Cell Line EDJ-KQ29176 Human 6505 Details Get a Quote
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