SACS Gene (Sacsin Molecular Chaperone)

Genetic and Functional Insights into SACS, Associated with Autosomal Recessive Spastic Ataxia of Charlevoix-Saguenay (ARSACS)

Gene Information Card

Symbol SACS
Full Name sacsin molecular chaperone
Gene Type protein-coding
Chromosomal Location 13q12.12
NCBI Gene ID 26278 ncbi.nlm.nih.gov/gene/26278
Ensembl ID ENSG00000151835
UniProt ID Q9NZJ4
OMIM ID 604490
HGNC ID 10519
Aliases ARSACS, SPAX6, PPP1R138

Description

The SACS gene encodes sacsin, a large protein (over 520 kDa) that functions as a molecular chaperone involved in mitochondrial dynamics, cytoskeletal organization, and protein quality control. Mutations in SACS cause autosomal recessive spastic ataxia of Charlevoix-Saguenay (ARSACS), a neurodegenerative disorder characterized by early-onset spasticity, ataxia, and peripheral neuropathy. Sacsin contains a DnaJ domain, HEPN domain, and a ubiquitin-like domain, suggesting roles in protein folding and stress response.

Disease Associations

Disease category Pathophysiological mechanism Genomic evidence
Spastic Ataxia of Charlevoix-Saguenay (ARSACS) Loss-of-function mutations in SACS impair sacsin chaperone activity, leading to mitochondrial dysfunction, abnormal intermediate filament aggregation, and Purkinje cell degeneration. ClinVar, OMIM
Autosomal Recessive Spastic Ataxia Type 6 (SPAX6) Same molecular mechanism as ARSACS; allelic disorder with overlapping clinical features. OMIM, ClinVar

Expression Profile

Tissue Expression
Tissue nTPM level
Cerebellum 12.3 Medium
Cerebral cortex 8.7 Low
Spinal cord 6.5 Low
Heart 4.2 Low
Skeletal muscle 3.1 Low
Testis 2.8 Low
Cell Line Expression
Cell Line nTPM Notes
SH-SY5Y (neuroblastoma) 5.6 Neuronal model
U-87 MG (glioblastoma) 4.1 Glial model
HEK 293 (embryonic kidney) 3.2 Non-neuronal
HeLa (cervical carcinoma) 2.5 Epithelial
Data source:Human Protein Atlas(proteinatlas.org)

Mutations & Variants

Hotspot Mutations
Variant Type Frequency Functional Description
c.8844delT (p.Phe2948Leufs*2) Frameshift Common in French-Canadian ARSACS Loss of function
c.11320C>T (p.Arg3774*) Nonsense Reported in multiple populations Loss of function
c.7498G>A (p.Gly2500Arg) Missense Rare Likely loss of function
c.1321C>T (p.Arg441*) Nonsense Found in Japanese ARSACS Loss of function
Mutation functional classification

Loss of Function (LOF)

Majority of SACS mutations are loss-of-function (nonsense, frameshift, splice-site), leading to truncated or absent sacsin protein, causing ARSACS.

Gain of Function (GOF)

No evidence of gain-of-function mutations in SACS.

Dominant Negative (DN)

No evidence of dominant-negative effects; disease is strictly autosomal recessive.

Pathways

• Protein processing in endoplasmic reticulum (KEGG: hsa04141)
• Mitochondrial protein import (Reactome: R-HSA-1268020)
• Chaperone-mediated protein folding (Reactome: R-HSA-390466)

Protein Summary

Sacsin is a large multidomain protein (4,579 amino acids) with a DnaJ domain at the N-terminus, a HEPN domain, and a C-terminal ubiquitin-like domain. It acts as a molecular chaperone, facilitating protein folding and mitochondrial homeostasis. Sacsin localizes to mitochondria and interacts with intermediate filaments (e.g., vimentin, GFAP). Loss of sacsin leads to mitochondrial fragmentation, impaired oxidative phosphorylation, and accumulation of protein aggregates, particularly in Purkinje cells of the cerebellum, explaining the neurodegenerative phenotype of ARSACS.

Related Products

Product name Cat.No. Species Gene ID
SACS Knockout HEK293 Cell Line EDJ-KQ8500 Human 26278 Details Get a Quote
SACS Knockout A-549 Cell Line EDJ-KQ34625 Human 26278 Details Get a Quote
SACS Knockout HCT 116 Cell Line EDJ-KQ34626 Human 26278 Details Get a Quote
SACS Knockout HeLa Cell Line EDJ-KQ34627 Human 26278 Details Get a Quote
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