SACS Gene (Sacsin Molecular Chaperone)
Genetic and Functional Insights into SACS, Associated with Autosomal Recessive Spastic Ataxia of Charlevoix-Saguenay (ARSACS)
Gene Information Card
| Symbol | SACS |
|---|---|
| Full Name | sacsin molecular chaperone |
| Gene Type | protein-coding |
| Chromosomal Location | 13q12.12 |
| NCBI Gene ID | 26278 ncbi.nlm.nih.gov/gene/26278 |
| Ensembl ID | ENSG00000151835 |
| UniProt ID | Q9NZJ4 |
| OMIM ID | 604490 |
| HGNC ID | 10519 |
| Aliases | ARSACS, SPAX6, PPP1R138 |
Description
The SACS gene encodes sacsin, a large protein (over 520 kDa) that functions as a molecular chaperone involved in mitochondrial dynamics, cytoskeletal organization, and protein quality control. Mutations in SACS cause autosomal recessive spastic ataxia of Charlevoix-Saguenay (ARSACS), a neurodegenerative disorder characterized by early-onset spasticity, ataxia, and peripheral neuropathy. Sacsin contains a DnaJ domain, HEPN domain, and a ubiquitin-like domain, suggesting roles in protein folding and stress response.
Disease Associations
| Disease category | Pathophysiological mechanism | Genomic evidence |
|---|---|---|
| Spastic Ataxia of Charlevoix-Saguenay (ARSACS) | Loss-of-function mutations in SACS impair sacsin chaperone activity, leading to mitochondrial dysfunction, abnormal intermediate filament aggregation, and Purkinje cell degeneration. | ClinVar, OMIM |
| Autosomal Recessive Spastic Ataxia Type 6 (SPAX6) | Same molecular mechanism as ARSACS; allelic disorder with overlapping clinical features. | OMIM, ClinVar |
Expression Profile
Tissue Expression
| Tissue | nTPM | level |
|---|---|---|
| Cerebellum | 12.3 | Medium |
| Cerebral cortex | 8.7 | Low |
| Spinal cord | 6.5 | Low |
| Heart | 4.2 | Low |
| Skeletal muscle | 3.1 | Low |
| Testis | 2.8 | Low |
Cell Line Expression
| Cell Line | nTPM | Notes |
|---|---|---|
| SH-SY5Y (neuroblastoma) | 5.6 | Neuronal model |
| U-87 MG (glioblastoma) | 4.1 | Glial model |
| HEK 293 (embryonic kidney) | 3.2 | Non-neuronal |
| HeLa (cervical carcinoma) | 2.5 | Epithelial |
Data source:Human Protein Atlas(proteinatlas.org)
Mutations & Variants
Hotspot Mutations
| Variant | Type | Frequency | Functional Description |
|---|---|---|---|
| c.8844delT (p.Phe2948Leufs*2) | Frameshift | Common in French-Canadian ARSACS | Loss of function |
| c.11320C>T (p.Arg3774*) | Nonsense | Reported in multiple populations | Loss of function |
| c.7498G>A (p.Gly2500Arg) | Missense | Rare | Likely loss of function |
| c.1321C>T (p.Arg441*) | Nonsense | Found in Japanese ARSACS | Loss of function |
Mutation functional classification
Loss of Function (LOF)
Majority of SACS mutations are loss-of-function (nonsense, frameshift, splice-site), leading to truncated or absent sacsin protein, causing ARSACS.
Gain of Function (GOF)
No evidence of gain-of-function mutations in SACS.
Dominant Negative (DN)
No evidence of dominant-negative effects; disease is strictly autosomal recessive.
View complete mutation data:
Gene Ontology (GO)
| • ATP binding (GO:0005524) | • protein folding (GO:0006457) |
| • positive regulation of protein binding (GO:0032092) | • unfolded protein binding (GO:0051082) |
| • mitochondrion (GO:0005739) | • cytosol (GO:0005829) |
Pathways
• Protein processing in endoplasmic reticulum (KEGG: hsa04141)
• Mitochondrial protein import (Reactome: R-HSA-1268020)
• Chaperone-mediated protein folding (Reactome: R-HSA-390466)
Protein Summary
Sacsin is a large multidomain protein (4,579 amino acids) with a DnaJ domain at the N-terminus, a HEPN domain, and a C-terminal ubiquitin-like domain. It acts as a molecular chaperone, facilitating protein folding and mitochondrial homeostasis. Sacsin localizes to mitochondria and interacts with intermediate filaments (e.g., vimentin, GFAP). Loss of sacsin leads to mitochondrial fragmentation, impaired oxidative phosphorylation, and accumulation of protein aggregates, particularly in Purkinje cells of the cerebellum, explaining the neurodegenerative phenotype of ARSACS.
Related Services
Related Products
| Product name | Cat.No. | Species | Gene ID | |
|---|---|---|---|---|
| SACS Knockout HEK293 Cell Line | EDJ-KQ8500 | Human | 26278 | Details Get a Quote |
| SACS Knockout A-549 Cell Line | EDJ-KQ34625 | Human | 26278 | Details Get a Quote |
| SACS Knockout HCT 116 Cell Line | EDJ-KQ34626 | Human | 26278 | Details Get a Quote |
| SACS Knockout HeLa Cell Line | EDJ-KQ34627 | Human | 26278 | Details Get a Quote |