RPL36A-HNRNPH2 readthrough
A readthrough transcript linking ribosomal protein RPL36A and heterogeneous nuclear ribonucleoprotein H2
Gene Information Card
| Symbol | RPL36A-HNRNPH2 |
|---|---|
| Full Name | RPL36A-HNRNPH2 readthrough (NMD candidate) |
| Gene Type | readthrough transcript (protein-coding) |
| Chromosomal Location | Xq22.1 |
| NCBI Gene ID | 100526737 ncbi.nlm.nih.gov/gene/100526737 |
| Ensembl ID | ENSG00000267260 |
| UniProt ID | P0DN79 |
| OMIM ID | 300610 |
| HGNC ID | 44277 |
| Aliases | RPL36A-HNRNPH2, RPL36A_HNRNPH2 |
Description
RPL36A-HNRNPH2 is a readthrough transcript that spans the adjacent RPL36A and HNRNPH2 genes on chromosome Xq22.1. The transcript produces a fusion protein that includes the N-terminal region of ribosomal protein L36a (RPL36A) and the full-length heterogeneous nuclear ribonucleoprotein H2 (HNRNPH2). This readthrough is subject to nonsense-mediated decay (NMD) under normal conditions but may escape NMD in certain contexts. The HNRNPH2 component is involved in RNA processing and splicing regulation, while RPL36A is a component of the 60S ribosomal subunit. The readthrough product may have altered function compared to the individual proteins.
Disease Associations
| Disease category | Pathophysiological mechanism | Genomic evidence |
|---|---|---|
| No specific disease association reported | Not applicable | No curated evidence in OMIM, ClinVar, or COSMIC |
Expression Profile
Tissue Expression
| Tissue | nTPM | level |
|---|---|---|
| Testis | 0.3 | Low |
| Lymph node | 0.2 | Low |
| Other tissues | <0.1 | Not detected |
Cell Line Expression
| Cell Line | nTPM | Notes |
|---|---|---|
| HeLa | 0.1 | Low expression |
| K562 | 0.1 | Low expression |
| HEK293 | 0.1 | Low expression |
Data source:Human Protein Atlas(proteinatlas.org)
Mutations & Variants
Hotspot Mutations
| Variant | Type | Frequency | Functional Description |
|---|---|---|---|
| No curated mutations | Not applicable | Not applicable | Not applicable |
Mutation functional classification
Loss of Function (LOF)
No data
Gain of Function (GOF)
No data
Dominant Negative (DN)
No data
View complete mutation data:
Gene Ontology (GO)
| • RNA binding (GO:0003723) | • structural constituent of ribosome (GO:0003735) |
| • mRNA processing (GO:0006397) | • RNA splicing (GO:0008380) |
Pathways
• No specific pathway annotations for the readthrough product
Protein Summary
The RPL36A-HNRNPH2 readthrough protein is a fusion of the N-terminal 13 amino acids of ribosomal protein L36a (RPL36A) and the full-length heterogeneous nuclear ribonucleoprotein H2 (HNRNPH2). The HNRNPH2 portion contains three RNA recognition motifs (RRMs) and a KH domain, mediating binding to G-rich RNA sequences and involvement in pre-mRNA splicing and processing. The short RPL36A segment may affect localization or stability. The protein is predicted to localize to the nucleus and nucleolus, consistent with HNRNPH2 function.
Related Services
Related Products
| Product name | Cat.No. | Species | Gene ID | |
|---|---|---|---|---|
| RPL36A-HNRNPH2 Knockout HEK293 Cell Line | EDJ-KQ52492 | Human | 100529097 | Details Get a Quote |
| RPL36A-HNRNPH2 Knockout HeLa Cell Line | EDJ-KQ60955 | Human | 100529097 | Details Get a Quote |
| RPL36A-HNRNPH2 Knockout A-549 Cell Line | EDJ-KQ69430 | Human | 100529097 | Details Get a Quote |
| RPL36A-HNRNPH2 Knockout HCT 116 Cell Line | EDJ-KQ77781 | Human | 100529097 | Details Get a Quote |